Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PKNOX1P55347 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PKNOX1P55347 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PKNOX1P55347 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PKNOX1P55347 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PKNOX1P55347 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.06■□□□□ 0.96
PKNOX1P55347 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.06■□□□□ 0.96
PKNOX1P55347 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PKNOX1P55347 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PKNOX1P55347 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.06■□□□□ 0.96
PKNOX1P55347 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKNOX1P55347 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.05■□□□□ 0.96
PKNOX1P55347 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PKNOX1P55347 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.05■□□□□ 0.96
PKNOX1P55347 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKNOX1P55347 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKNOX1P55347 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKNOX1P55347 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.05■□□□□ 0.96
PKNOX1P55347 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PKNOX1P55347 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKNOX1P55347 MIR3621-201ENST00000580529 85 ntBASIC21.05■□□□□ 0.96
PKNOX1P55347 AC099791.2-201ENST00000605725 427 ntBASIC21.05■□□□□ 0.96
PKNOX1P55347 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKNOX1P55347 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKNOX1P55347 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.05■□□□□ 0.96
PKNOX1P55347 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.04■□□□□ 0.96
PKNOX1P55347 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PKNOX1P55347 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKNOX1P55347 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKNOX1P55347 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PKNOX1P55347 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PKNOX1P55347 GUSBP5-201ENST00000418136 578 ntBASIC21.04■□□□□ 0.96
PKNOX1P55347 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.04■□□□□ 0.96
PKNOX1P55347 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKNOX1P55347 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKNOX1P55347 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PKNOX1P55347 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PKNOX1P55347 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.04■□□□□ 0.96
PKNOX1P55347 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PKNOX1P55347 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.04■□□□□ 0.96
PKNOX1P55347 AC073130.3-201ENST00000624389 2278 ntBASIC21.03■□□□□ 0.96
PKNOX1P55347 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.03■□□□□ 0.96
PKNOX1P55347 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKNOX1P55347 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
PKNOX1P55347 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PKNOX1P55347 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKNOX1P55347 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
PKNOX1P55347 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
PKNOX1P55347 AC079089.2-201ENST00000531211 1277 ntBASIC21.03■□□□□ 0.96
PKNOX1P55347 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PKNOX1P55347 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.03■□□□□ 0.96
PKNOX1P55347 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.03■□□□□ 0.96
PKNOX1P55347 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.03■□□□□ 0.96
PKNOX1P55347 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKNOX1P55347 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
PKNOX1P55347 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKNOX1P55347 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.03■□□□□ 0.96
PKNOX1P55347 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PKNOX1P55347 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKNOX1P55347 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PKNOX1P55347 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKNOX1P55347 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKNOX1P55347 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKNOX1P55347 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.02■□□□□ 0.96
PKNOX1P55347 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.02■□□□□ 0.96
PKNOX1P55347 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.02■□□□□ 0.96
PKNOX1P55347 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PKNOX1P55347 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKNOX1P55347 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKNOX1P55347 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKNOX1P55347 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.02■□□□□ 0.96
PKNOX1P55347 AC068587.7-201ENST00000641602 218 ntBASIC21.02■□□□□ 0.96
PKNOX1P55347 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PKNOX1P55347 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PKNOX1P55347 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.02■□□□□ 0.96
PKNOX1P55347 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PKNOX1P55347 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKNOX1P55347 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.02■□□□□ 0.96
PKNOX1P55347 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
PKNOX1P55347 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PKNOX1P55347 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKNOX1P55347 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PKNOX1P55347 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKNOX1P55347 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
PKNOX1P55347 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.01■□□□□ 0.95
PKNOX1P55347 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.01■□□□□ 0.95
PKNOX1P55347 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKNOX1P55347 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKNOX1P55347 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKNOX1P55347 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PKNOX1P55347 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PKNOX1P55347 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PKNOX1P55347 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21■□□□□ 0.95
PKNOX1P55347 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PKNOX1P55347 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PKNOX1P55347 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21■□□□□ 0.95
PKNOX1P55347 MIR3181-201ENST00000578512 73 ntBASIC21■□□□□ 0.95
PKNOX1P55347 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21■□□□□ 0.95
PKNOX1P55347 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21■□□□□ 0.95
PKNOX1P55347 AC092171.4-201ENST00000609130 632 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms