Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
PDE1AP54750 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC26.42■■□□□ 1.82
PDE1AP54750 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PDE1AP54750 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PDE1AP54750 AF213884.3-201ENST00000563833 479 ntBASIC26.42■■□□□ 1.82
PDE1AP54750 AL136967.2-201ENST00000623968 743 ntBASIC26.42■■□□□ 1.82
PDE1AP54750 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PDE1AP54750 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC26.42■■□□□ 1.82
PDE1AP54750 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PDE1AP54750 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PDE1AP54750 BID-212ENST00000614949 1988 ntTSL 5 BASIC26.42■■□□□ 1.82
PDE1AP54750 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
PDE1AP54750 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDE1AP54750 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.41■■□□□ 1.82
PDE1AP54750 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.41■■□□□ 1.82
PDE1AP54750 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PDE1AP54750 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.41■■□□□ 1.82
PDE1AP54750 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDE1AP54750 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.41■■□□□ 1.82
PDE1AP54750 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.41■■□□□ 1.82
PDE1AP54750 SUDS3P1-201ENST00000505831 966 ntBASIC26.41■■□□□ 1.82
PDE1AP54750 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PDE1AP54750 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDE1AP54750 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDE1AP54750 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC26.41■■□□□ 1.82
PDE1AP54750 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.41■■□□□ 1.82
PDE1AP54750 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.4■■□□□ 1.82
PDE1AP54750 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.4■■□□□ 1.82
PDE1AP54750 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.4■■□□□ 1.82
PDE1AP54750 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC26.4■■□□□ 1.82
PDE1AP54750 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDE1AP54750 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.4■■□□□ 1.82
PDE1AP54750 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
PDE1AP54750 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PDE1AP54750 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDE1AP54750 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PDE1AP54750 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PDE1AP54750 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDE1AP54750 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PDE1AP54750 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
PDE1AP54750 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC26.39■■□□□ 1.82
PDE1AP54750 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.39■■□□□ 1.82
PDE1AP54750 SMUG1P1-201ENST00000590640 811 ntBASIC26.39■■□□□ 1.82
PDE1AP54750 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
PDE1AP54750 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.39■■□□□ 1.81
PDE1AP54750 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.39■■□□□ 1.81
PDE1AP54750 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PDE1AP54750 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
PDE1AP54750 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PDE1AP54750 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.38■■□□□ 1.81
PDE1AP54750 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.38■■□□□ 1.81
PDE1AP54750 RASA4CP-201ENST00000424092 1398 ntBASIC26.38■■□□□ 1.81
PDE1AP54750 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.38■■□□□ 1.81
PDE1AP54750 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.38■■□□□ 1.81
PDE1AP54750 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDE1AP54750 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDE1AP54750 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDE1AP54750 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
PDE1AP54750 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.37■■□□□ 1.81
PDE1AP54750 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.37■■□□□ 1.81
PDE1AP54750 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.37■■□□□ 1.81
PDE1AP54750 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDE1AP54750 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.37■■□□□ 1.81
PDE1AP54750 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDE1AP54750 CLDN5-201ENST00000403084 2357 ntBASIC26.36■■□□□ 1.81
PDE1AP54750 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
PDE1AP54750 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.36■■□□□ 1.81
PDE1AP54750 AC091305.1-201ENST00000479476 895 ntBASIC26.36■■□□□ 1.81
PDE1AP54750 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PDE1AP54750 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PDE1AP54750 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.36■■□□□ 1.81
PDE1AP54750 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.36■■□□□ 1.81
PDE1AP54750 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PDE1AP54750 TSPY26P-201ENST00000476365 1326 ntBASIC26.36■■□□□ 1.81
PDE1AP54750 GOLGA2P6-201ENST00000340929 2049 ntBASIC26.36■■□□□ 1.81
PDE1AP54750 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
PDE1AP54750 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE1AP54750 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE1AP54750 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC26.35■■□□□ 1.81
PDE1AP54750 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE1AP54750 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE1AP54750 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE1AP54750 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
PDE1AP54750 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE1AP54750 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PDE1AP54750 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.35■■□□□ 1.81
PDE1AP54750 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PDE1AP54750 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
PDE1AP54750 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PDE1AP54750 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PDE1AP54750 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDE1AP54750 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
PDE1AP54750 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDE1AP54750 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.34■■□□□ 1.81
PDE1AP54750 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.34■■□□□ 1.81
PDE1AP54750 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDE1AP54750 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDE1AP54750 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDE1AP54750 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
PDE1AP54750 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms