Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A12P48065 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC6A12P48065 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A12P48065 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A12P48065 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A12P48065 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC6A12P48065 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A12P48065 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A12P48065 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A12P48065 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A12P48065 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A12P48065 AC099791.1-201ENST00000416440 715 ntBASIC20.87■□□□□ 0.93
SLC6A12P48065 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC6A12P48065 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC6A12P48065 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A12P48065 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A12P48065 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A12P48065 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A12P48065 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SLC6A12P48065 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A12P48065 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC6A12P48065 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
SLC6A12P48065 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A12P48065 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC6A12P48065 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.86■□□□□ 0.93
SLC6A12P48065 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.86■□□□□ 0.93
SLC6A12P48065 AL355001.2-201ENST00000620617 1191 ntBASIC20.86■□□□□ 0.93
SLC6A12P48065 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC6A12P48065 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A12P48065 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A12P48065 AC026471.6-201ENST00000622954 1905 ntBASIC20.86■□□□□ 0.93
SLC6A12P48065 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
SLC6A12P48065 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC6A12P48065 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A12P48065 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A12P48065 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A12P48065 MIR939-201ENST00000401314 82 ntBASIC20.85■□□□□ 0.93
SLC6A12P48065 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.85■□□□□ 0.93
SLC6A12P48065 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SLC6A12P48065 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SLC6A12P48065 CLDN5-201ENST00000403084 2357 ntBASIC20.85■□□□□ 0.93
SLC6A12P48065 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A12P48065 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
SLC6A12P48065 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A12P48065 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A12P48065 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC6A12P48065 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC6A12P48065 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A12P48065 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A12P48065 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A12P48065 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A12P48065 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A12P48065 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC6A12P48065 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC6A12P48065 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.84■□□□□ 0.93
SLC6A12P48065 AL034346.1-201ENST00000568244 1277 ntBASIC20.84■□□□□ 0.93
SLC6A12P48065 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A12P48065 SMUG1P1-201ENST00000590640 811 ntBASIC20.84■□□□□ 0.93
SLC6A12P48065 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC6A12P48065 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SLC6A12P48065 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC6A12P48065 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A12P48065 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A12P48065 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC6A12P48065 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A12P48065 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A12P48065 AF213884.3-201ENST00000563833 479 ntBASIC20.83■□□□□ 0.93
SLC6A12P48065 AL139246.5-201ENST00000606645 996 ntBASIC20.83■□□□□ 0.93
SLC6A12P48065 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A12P48065 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC6A12P48065 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SLC6A12P48065 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.83■□□□□ 0.92
SLC6A12P48065 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC6A12P48065 RASA4CP-201ENST00000424092 1398 ntBASIC20.83■□□□□ 0.92
SLC6A12P48065 AP004607.7-201ENST00000527152 1677 ntBASIC20.83■□□□□ 0.92
SLC6A12P48065 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SLC6A12P48065 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
SLC6A12P48065 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC6A12P48065 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A12P48065 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SLC6A12P48065 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A12P48065 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A12P48065 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A12P48065 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC6A12P48065 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SLC6A12P48065 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A12P48065 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A12P48065 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A12P48065 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A12P48065 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SLC6A12P48065 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC6A12P48065 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC6A12P48065 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC6A12P48065 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC6A12P48065 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A12P48065 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SLC6A12P48065 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.81■□□□□ 0.92
SLC6A12P48065 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.81■□□□□ 0.92
SLC6A12P48065 AL136967.2-201ENST00000623968 743 ntBASIC20.81■□□□□ 0.92
SLC6A12P48065 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms