Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 COM2YER130C 1332 nt3.69□□□□□ -1.82
RTR1P40084 RDI1YDL135C 609 nt3.68□□□□□ -1.82
RTR1P40084 MOB2YFL034C-B 864 nt3.68□□□□□ -1.82
RTR1P40084 SNL1YIL016W 480 nt3.68□□□□□ -1.82
RTR1P40084 RPS31YLR167W 459 nt3.68□□□□□ -1.82
RTR1P40084 RPL6AYML073C 531 nt3.68□□□□□ -1.82
RTR1P40084 YNL067W-AYNL067W-A 147 nt3.68□□□□□ -1.82
RTR1P40084 YPR050CYPR050C 414 nt3.68□□□□□ -1.82
RTR1P40084 ISW2YOR304W 3363 nt3.68□□□□□ -1.82
RTR1P40084 ORC4YPR162C 1590 nt3.68□□□□□ -1.82
RTR1P40084 PMR1YGL167C 2853 nt3.67□□□□□ -1.82
RTR1P40084 MUP3YHL036W 1641 nt3.67□□□□□ -1.82
RTR1P40084 FUN12YAL035W 3009 nt3.67□□□□□ -1.82
RTR1P40084 YPT35YHR105W 645 nt3.67□□□□□ -1.82
RTR1P40084 RUF21RUF21 707 nt3.67□□□□□ -1.82
RTR1P40084 YNR071CYNR071C 1029 nt3.67□□□□□ -1.82
RTR1P40084 DDP1YOR163W 567 nt3.67□□□□□ -1.82
RTR1P40084 ANT1YPR128C 987 nt3.67□□□□□ -1.82
RTR1P40084 AST2YER101C 1293 nt3.66□□□□□ -1.82
RTR1P40084 YGL082WYGL082W 1146 nt3.66□□□□□ -1.82
RTR1P40084 TDA8YAL064C-A 381 nt3.66□□□□□ -1.82
RTR1P40084 VPS27YNR006W 1869 nt3.66□□□□□ -1.82
RTR1P40084 STT4YLR305C 5703 nt3.66□□□□□ -1.82
RTR1P40084 SMI1YGR229C 1518 nt3.65□□□□□ -1.82
RTR1P40084 MUM3YOR298W 1440 nt3.65□□□□□ -1.83
RTR1P40084 TOM20YGR082W 552 nt3.65□□□□□ -1.83
RTR1P40084 PDX1YGR193C 1233 nt3.65□□□□□ -1.83
RTR1P40084 FMC1YIL098C 468 nt3.65□□□□□ -1.83
RTR1P40084 YAL065CYAL065C 387 nt3.65□□□□□ -1.83
RTR1P40084 COX14YML129C 213 nt3.65□□□□□ -1.83
RTR1P40084 NRP1YDL167C 2160 nt3.65□□□□□ -1.83
RTR1P40084 ULP1YPL020C 1866 nt3.64□□□□□ -1.83
RTR1P40084 SEC6YIL068C 2418 nt3.64□□□□□ -1.83
RTR1P40084 SPO77YLR341W 1434 nt3.64□□□□□ -1.83
RTR1P40084 YPL109CYPL109C 1974 nt3.64□□□□□ -1.83
RTR1P40084 RPS18AYDR450W 441 nt3.64□□□□□ -1.83
RTR1P40084 PFA5YDR459C 1125 nt3.64□□□□□ -1.83
RTR1P40084 ERV14YGL054C 417 nt3.64□□□□□ -1.83
RTR1P40084 USE1YGL098W 738 nt3.64□□□□□ -1.83
RTR1P40084 POG1YIL122W 1056 nt3.64□□□□□ -1.83
RTR1P40084 DCS1YLR270W 1053 nt3.64□□□□□ -1.83
RTR1P40084 REH1YLR387C 1299 nt3.64□□□□□ -1.83
RTR1P40084 YPP1YGR198W 2454 nt3.64□□□□□ -1.83
RTR1P40084 ATG27YJL178C 816 nt3.63□□□□□ -1.83
RTR1P40084 RNH203YLR154C 333 nt3.63□□□□□ -1.83
RTR1P40084 RPL20BYOR312C 519 nt3.63□□□□□ -1.83
RTR1P40084 SYT1YPR095C 3681 nt3.63□□□□□ -1.83
RTR1P40084 CLD1YGR110W 1338 nt3.63□□□□□ -1.83
RTR1P40084 FBP26YJL155C 1359 nt3.63□□□□□ -1.83
RTR1P40084 RTK1YDL025C 1863 nt3.62□□□□□ -1.83
RTR1P40084 GZF3YJL110C 1656 nt3.62□□□□□ -1.83
RTR1P40084 POL31YJR006W 1464 nt3.62□□□□□ -1.83
RTR1P40084 AIM14YGL160W 1713 nt3.62□□□□□ -1.83
RTR1P40084 QCR10YHR001W-A 234 nt3.62□□□□□ -1.83
RTR1P40084 GCD7YLR291C 1146 nt3.62□□□□□ -1.83
RTR1P40084 YLR462WYLR462W 609 nt3.62□□□□□ -1.83
RTR1P40084 YPL107WYPL107W 747 nt3.62□□□□□ -1.83
RTR1P40084 SPB4YFL002C 1821 nt3.62□□□□□ -1.83
RTR1P40084 SDS23YGL056C 1584 nt3.62□□□□□ -1.83
RTR1P40084 BEM4YPL161C 1902 nt3.62□□□□□ -1.83
RTR1P40084 PRP3YDR473C 1410 nt3.61□□□□□ -1.83
RTR1P40084 FLO1YAR050W 4614 nt3.61□□□□□ -1.83
RTR1P40084 PEF1YGR058W 1008 nt3.61□□□□□ -1.83
RTR1P40084 MYO3YKL129C 3819 nt3.61□□□□□ -1.83
RTR1P40084 USB1YLR132C 873 nt3.61□□□□□ -1.83
RTR1P40084 MRPL24YMR193W 777 nt3.61□□□□□ -1.83
RTR1P40084 YNL013CYNL013C 378 nt3.61□□□□□ -1.83
RTR1P40084 REB1YBR049C 2433 nt3.6□□□□□ -1.83
RTR1P40084 YGL218WYGL218W 651 nt3.6□□□□□ -1.83
RTR1P40084 SCM4YGR049W 564 nt3.6□□□□□ -1.83
RTR1P40084 CLC1YGR167W 702 nt3.6□□□□□ -1.83
RTR1P40084 DDI3YNL335W 678 nt3.6□□□□□ -1.83
RTR1P40084 YPL088WYPL088W 1029 nt3.6□□□□□ -1.83
RTR1P40084 UTP25YIL091C 2166 nt3.6□□□□□ -1.83
RTR1P40084 IMH1YLR309C 2736 nt3.6□□□□□ -1.83
RTR1P40084 YLR177WYLR177W 1887 nt3.6□□□□□ -1.83
RTR1P40084 VPS33YLR396C 2076 nt3.59□□□□□ -1.83
RTR1P40084 ITC1YGL133W 3795 nt3.59□□□□□ -1.83
RTR1P40084 ERP6YGL002W 651 nt3.59□□□□□ -1.83
RTR1P40084 YLR339CYLR339C 552 nt3.59□□□□□ -1.83
RTR1P40084 SAM37YMR060C 984 nt3.59□□□□□ -1.83
RTR1P40084 YOR186WYOR186W 435 nt3.59□□□□□ -1.83
RTR1P40084 SER3YER081W 1410 nt3.59□□□□□ -1.84
RTR1P40084 ERG11YHR007C 1593 nt3.59□□□□□ -1.84
RTR1P40084 PGS1YCL004W 1566 nt3.59□□□□□ -1.84
RTR1P40084 BAR1YIL015W 1764 nt3.58□□□□□ -1.84
RTR1P40084 UBP12YJL197W 3765 nt3.58□□□□□ -1.84
RTR1P40084 ERD2YBL040C 660 nt3.58□□□□□ -1.84
RTR1P40084 SSO2YMR183C 888 nt3.58□□□□□ -1.84
RTR1P40084 YOR385WYOR385W 873 nt3.58□□□□□ -1.84
RTR1P40084 RPL33AYPL143W 324 nt3.58□□□□□ -1.84
RTR1P40084 ORC1YML065W 2745 nt3.57□□□□□ -1.84
RTR1P40084 YPL216WYPL216W 3309 nt3.57□□□□□ -1.84
RTR1P40084 YCR101CYCR101C 549 nt3.57□□□□□ -1.84
RTR1P40084 SPT15YER148W 723 nt3.57□□□□□ -1.84
RTR1P40084 TIS11YLR136C 858 nt3.57□□□□□ -1.84
RTR1P40084 SEC14YMR079W 915 nt3.57□□□□□ -1.84
RTR1P40084 YOL079WYOL079W 399 nt3.57□□□□□ -1.84
RTR1P40084 ZDS2YML109W 2829 nt3.57□□□□□ -1.84
RTR1P40084 SLM2YNL047C 1971 nt3.56□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms