Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 JEN1YKL217W 1851 nt3.34□□□□□ -1.87
TDA11P38854 KAP95YLR347C 2586 nt3.34□□□□□ -1.88
TDA11P38854 DSN1YIR010W 1731 nt3.33□□□□□ -1.88
TDA11P38854 MAL12YGR292W 1755 nt3.33□□□□□ -1.88
TDA11P38854 MAL32YBR299W 1755 nt3.33□□□□□ -1.88
TDA11P38854 NAT1YDL040C 2565 nt3.33□□□□□ -1.88
TDA11P38854 YVC1YOR087W 2028 nt3.33□□□□□ -1.88
TDA11P38854 snR63snR63 255 nt3.33□□□□□ -1.88
TDA11P38854 MRP8YKL142W 660 nt3.33□□□□□ -1.88
TDA11P38854 GTT2YLL060C 702 nt3.33□□□□□ -1.88
TDA11P38854 IMP1YMR150C 573 nt3.33□□□□□ -1.88
TDA11P38854 ARP4YJL081C 1470 nt3.33□□□□□ -1.88
TDA11P38854 ARO80YDR421W 2853 nt3.33□□□□□ -1.88
TDA11P38854 FUN12YAL035W 3009 nt3.33□□□□□ -1.88
TDA11P38854 SPT10YJL127C 1923 nt3.32□□□□□ -1.88
TDA11P38854 SSE2YBR169C 2082 nt3.32□□□□□ -1.88
TDA11P38854 YPT35YHR105W 645 nt3.32□□□□□ -1.88
TDA11P38854 YAL004WYAL004W 648 nt3.32□□□□□ -1.88
TDA11P38854 REH1YLR387C 1299 nt3.32□□□□□ -1.88
TDA11P38854 URA4YLR420W 1095 nt3.32□□□□□ -1.88
TDA11P38854 YLR444CYLR444C 303 nt3.32□□□□□ -1.88
TDA11P38854 DIB1YPR082C 432 nt3.32□□□□□ -1.88
TDA11P38854 NUP60YAR002W 1620 nt3.32□□□□□ -1.88
TDA11P38854 LRG1YDL240W 3054 nt3.31□□□□□ -1.88
TDA11P38854 GSC2YGR032W 5688 nt3.31□□□□□ -1.88
TDA11P38854 YDL180WYDL180W 1644 nt3.31□□□□□ -1.88
TDA11P38854 YGR117CYGR117C 1431 nt3.31□□□□□ -1.88
TDA11P38854 PET130YJL023C 1044 nt3.31□□□□□ -1.88
TDA11P38854 HRT3YLR097C 1035 nt3.31□□□□□ -1.88
TDA11P38854 NDJ1YOL104C 1059 nt3.31□□□□□ -1.88
TDA11P38854 YBR096WYBR096W 693 nt3.31□□□□□ -1.88
TDA11P38854 MRPL37YBR268W 318 nt3.31□□□□□ -1.88
TDA11P38854 YMR1YJR110W 2067 nt3.31□□□□□ -1.88
TDA11P38854 ULP1YPL020C 1866 nt3.3□□□□□ -1.88
TDA11P38854 RCY1YJL204C 2523 nt3.3□□□□□ -1.88
TDA11P38854 NUP85YJR042W 2235 nt3.3□□□□□ -1.88
TDA11P38854 GRX3YDR098C 858 nt3.3□□□□□ -1.88
TDA11P38854 YDR149CYDR149C 708 nt3.3□□□□□ -1.88
TDA11P38854 RFM1YOR279C 933 nt3.3□□□□□ -1.88
TDA11P38854 YBR242WYBR242W 717 nt3.3□□□□□ -1.88
TDA11P38854 DOA4YDR069C 2781 nt3.3□□□□□ -1.88
TDA11P38854 SEC6YIL068C 2418 nt3.3□□□□□ -1.88
TDA11P38854 MEF1YLR069C 2286 nt3.3□□□□□ -1.88
TDA11P38854 MEK1YOR351C 1494 nt3.29□□□□□ -1.88
TDA11P38854 ATG26YLR189C 3597 nt3.29□□□□□ -1.88
TDA11P38854 STE14YDR410C 720 nt3.29□□□□□ -1.88
TDA11P38854 FOL2YGR267C 732 nt3.29□□□□□ -1.88
TDA11P38854 YKT6YKL196C 603 nt3.29□□□□□ -1.88
TDA11P38854 CMD1YBR109C 444 nt3.29□□□□□ -1.88
TDA11P38854 MRH4YGL064C 1686 nt3.29□□□□□ -1.88
TDA11P38854 MIC60YKR016W 1623 nt3.29□□□□□ -1.88
TDA11P38854 YSP2YDR326C 4317 nt3.28□□□□□ -1.88
TDA11P38854 SHU2YDR078C 672 nt3.28□□□□□ -1.88
TDA11P38854 WBP1YEL002C 1293 nt3.28□□□□□ -1.88
TDA11P38854 SCL1YGL011C 759 nt3.28□□□□□ -1.88
TDA11P38854 SCM4YGR049W 564 nt3.28□□□□□ -1.88
TDA11P38854 YBL096CYBL096C 309 nt3.28□□□□□ -1.88
TDA11P38854 snR34snR34 203 nt3.28□□□□□ -1.88
TDA11P38854 TFB2YPL122C 1542 nt3.28□□□□□ -1.88
TDA11P38854 YBR238CYBR238C 2196 nt3.28□□□□□ -1.88
TDA11P38854 IMH1YLR309C 2736 nt3.28□□□□□ -1.89
TDA11P38854 SQS1YNL224C 2304 nt3.27□□□□□ -1.89
TDA11P38854 YFL040WYFL040W 1623 nt3.27□□□□□ -1.89
TDA11P38854 SUP45YBR143C 1314 nt3.27□□□□□ -1.89
TDA11P38854 PGS1YCL004W 1566 nt3.27□□□□□ -1.89
TDA11P38854 ERJ5YFR041C 888 nt3.27□□□□□ -1.89
TDA11P38854 TOS8YGL096W 831 nt3.27□□□□□ -1.89
TDA11P38854 PHD1YKL043W 1101 nt3.27□□□□□ -1.89
TDA11P38854 MRPS17YMR188C 714 nt3.27□□□□□ -1.89
TDA11P38854 YBL065WYBL065W 345 nt3.27□□□□□ -1.89
TDA11P38854 YBL081WYBL081W 1107 nt3.27□□□□□ -1.89
TDA11P38854 CYC2YOR037W 1101 nt3.27□□□□□ -1.89
TDA11P38854 YOR082CYOR082C 342 nt3.27□□□□□ -1.89
TDA11P38854 UAF30YOR295W 687 nt3.27□□□□□ -1.89
TDA11P38854 RNR1YER070W 2667 nt3.27□□□□□ -1.89
TDA11P38854 GYP6YJL044C 1377 nt3.26□□□□□ -1.89
TDA11P38854 PST1YDR055W 1335 nt3.26□□□□□ -1.89
TDA11P38854 ISW2YOR304W 3363 nt3.26□□□□□ -1.89
TDA11P38854 YGL118CYGL118C 438 nt3.26□□□□□ -1.89
TDA11P38854 ERG20YJL167W 1059 nt3.26□□□□□ -1.89
TDA11P38854 TMA19YKL056C 504 nt3.26□□□□□ -1.89
TDA11P38854 TPM1YNL079C 600 nt3.26□□□□□ -1.89
TDA11P38854 YKR015CYKR015C 1707 nt3.26□□□□□ -1.89
TDA11P38854 FRE4YNR060W 2160 nt3.26□□□□□ -1.89
TDA11P38854 SPO71YDR104C 3738 nt3.26□□□□□ -1.89
TDA11P38854 NRP1YDL167C 2160 nt3.25□□□□□ -1.89
TDA11P38854 TPD3YAL016W 1908 nt3.25□□□□□ -1.89
TDA11P38854 YDR090CYDR090C 933 nt3.25□□□□□ -1.89
TDA11P38854 FMP32YFL046W 624 nt3.25□□□□□ -1.89
TDA11P38854 RPL22AYLR061W 366 nt3.25□□□□□ -1.89
TDA11P38854 RPN13YLR421C 471 nt3.25□□□□□ -1.89
TDA11P38854 RIB4YOL143C 510 nt3.25□□□□□ -1.89
TDA11P38854 HSH49YOR319W 642 nt3.25□□□□□ -1.89
TDA11P38854 snR17asnR17a 333 nt3.25□□□□□ -1.89
TDA11P38854 SER3YER081W 1410 nt3.25□□□□□ -1.89
TDA11P38854 HFD1YMR110C 1599 nt3.25□□□□□ -1.89
TDA11P38854 YDL176WYDL176W 2127 nt3.25□□□□□ -1.89
TDA11P38854 CLG1YGL215W 1359 nt3.25□□□□□ -1.89
TDA11P38854 PMT6YGR199W 2280 nt3.24□□□□□ -1.89
TDA11P38854 SLA1YBL007C 3735 nt3.24□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 56.5 ms