Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 AVT7YIL088C 1473 nt4.32□□□□□ -1.72
MSH1P25846 SRB7YDR308C 423 nt4.32□□□□□ -1.72
MSH1P25846 FCF1YDR339C 570 nt4.32□□□□□ -1.72
MSH1P25846 YPR1YDR368W 939 nt4.32□□□□□ -1.72
MSH1P25846 RPL22BYFL034C-A 369 nt4.32□□□□□ -1.72
MSH1P25846 RPL8AYHL033C 771 nt4.32□□□□□ -1.72
MSH1P25846 AUR1YKL004W 1206 nt4.32□□□□□ -1.72
MSH1P25846 YPL278CYPL278C 303 nt4.32□□□□□ -1.72
MSH1P25846 FYV5YCL058C 459 nt4.32□□□□□ -1.72
MSH1P25846 TRK1YJL129C 3708 nt4.31□□□□□ -1.72
MSH1P25846 PUB1YNL016W 1362 nt4.31□□□□□ -1.72
MSH1P25846 ELO2YCR034W 1044 nt4.31□□□□□ -1.72
MSH1P25846 UBC9YDL064W 474 nt4.31□□□□□ -1.72
MSH1P25846 ATP5YDR298C 639 nt4.31□□□□□ -1.72
MSH1P25846 BUD16YEL029C 939 nt4.31□□□□□ -1.72
MSH1P25846 MET14YKL001C 609 nt4.31□□□□□ -1.72
MSH1P25846 YAR075WYAR075W 474 nt4.31□□□□□ -1.72
MSH1P25846 YBR116CYBR116C 528 nt4.31□□□□□ -1.72
MSH1P25846 BI3Q0115 1554 nt4.31□□□□□ -1.72
MSH1P25846 SEC59YMR013C 1560 nt4.31□□□□□ -1.72
MSH1P25846 ECM16YMR128W 3804 nt4.31□□□□□ -1.72
MSH1P25846 ORC4YPR162C 1590 nt4.31□□□□□ -1.72
MSH1P25846 YIG1YPL201C 1386 nt4.3□□□□□ -1.72
MSH1P25846 COM2YER130C 1332 nt4.3□□□□□ -1.72
MSH1P25846 RNA14YMR061W 2034 nt4.3□□□□□ -1.72
MSH1P25846 TSC13YDL015C 933 nt4.3□□□□□ -1.72
MSH1P25846 CBS2YDR197W 1170 nt4.3□□□□□ -1.72
MSH1P25846 YFR057WYFR057W 456 nt4.3□□□□□ -1.72
MSH1P25846 VMA7YGR020C 357 nt4.3□□□□□ -1.72
MSH1P25846 PET130YJL023C 1044 nt4.3□□□□□ -1.72
MSH1P25846 IDP2YLR174W 1239 nt4.3□□□□□ -1.72
MSH1P25846 CSM3YMR048W 954 nt4.3□□□□□ -1.72
MSH1P25846 FMP41YNL168C 780 nt4.3□□□□□ -1.72
MSH1P25846 MER1YNL210W 813 nt4.3□□□□□ -1.72
MSH1P25846 SIL1YOL031C 1266 nt4.3□□□□□ -1.72
MSH1P25846 YBR242WYBR242W 717 nt4.3□□□□□ -1.72
MSH1P25846 YPS7YDR349C 1791 nt4.3□□□□□ -1.72
MSH1P25846 CIT1YNR001C 1440 nt4.29□□□□□ -1.72
MSH1P25846 SWH1YAR042W 3567 nt4.29□□□□□ -1.72
MSH1P25846 PSY4YBL046W 1326 nt4.29□□□□□ -1.72
MSH1P25846 COX4YGL187C 468 nt4.29□□□□□ -1.72
MSH1P25846 YGL230CYGL230C 444 nt4.29□□□□□ -1.72
MSH1P25846 GCD14YJL125C 1152 nt4.29□□□□□ -1.72
MSH1P25846 BAT2YJR148W 1131 nt4.29□□□□□ -1.72
MSH1P25846 PNG1YPL096W 1092 nt4.29□□□□□ -1.72
MSH1P25846 YPR078CYPR078C 1119 nt4.29□□□□□ -1.72
MSH1P25846 TAF7YMR227C 1773 nt4.28□□□□□ -1.72
MSH1P25846 BRE4YDL231C 3378 nt4.28□□□□□ -1.72
MSH1P25846 KRE28YDR532C 1158 nt4.28□□□□□ -1.72
MSH1P25846 CAP2YIL034C 864 nt4.28□□□□□ -1.72
MSH1P25846 RSM25YIL093C 795 nt4.28□□□□□ -1.72
MSH1P25846 YVH1YIR026C 1095 nt4.28□□□□□ -1.72
MSH1P25846 CNB1YKL190W 528 nt4.28□□□□□ -1.72
MSH1P25846 YML053CYML053C 639 nt4.28□□□□□ -1.72
MSH1P25846 YPT53YNL093W 663 nt4.28□□□□□ -1.72
MSH1P25846 YBR238CYBR238C 2196 nt4.28□□□□□ -1.72
MSH1P25846 EPO1YMR124W 2832 nt4.28□□□□□ -1.72
MSH1P25846 OSH2YDL019C 3852 nt4.28□□□□□ -1.72
MSH1P25846 GRS2YPR081C 1857 nt4.28□□□□□ -1.72
MSH1P25846 ZDS1YMR273C 2748 nt4.28□□□□□ -1.72
MSH1P25846 CHL1YPL008W 2586 nt4.27□□□□□ -1.73
MSH1P25846 YPR148CYPR148C 1308 nt4.27□□□□□ -1.73
MSH1P25846 MSS4YDR208W 2340 nt4.27□□□□□ -1.73
MSH1P25846 RSC3YDR303C 2658 nt4.27□□□□□ -1.73
MSH1P25846 DET1YDR051C 1005 nt4.27□□□□□ -1.73
MSH1P25846 YER076CYER076C 909 nt4.27□□□□□ -1.73
MSH1P25846 YBL029C-AYBL029C-A 285 nt4.27□□□□□ -1.73
MSH1P25846 TRI1YMR233W 681 nt4.27□□□□□ -1.73
MSH1P25846 PDR12YPL058C 4536 nt4.27□□□□□ -1.73
MSH1P25846 LYP1YNL268W 1836 nt4.27□□□□□ -1.73
MSH1P25846 TRS120YDR407C 3870 nt4.27□□□□□ -1.73
MSH1P25846 BUD5YCR038C 1929 nt4.27□□□□□ -1.73
MSH1P25846 ELM1YKL048C 1923 nt4.27□□□□□ -1.73
MSH1P25846 MCP2YLR253W 1710 nt4.26□□□□□ -1.73
MSH1P25846 FLO8YER109C 2400 nt4.26□□□□□ -1.73
MSH1P25846 CUE3YGL110C 1875 nt4.26□□□□□ -1.73
MSH1P25846 RPN6YDL097C 1305 nt4.26□□□□□ -1.73
MSH1P25846 GAC1YOR178C 2382 nt4.26□□□□□ -1.73
MSH1P25846 SPC19YDR201W 498 nt4.26□□□□□ -1.73
MSH1P25846 YGL108CYGL108C 423 nt4.26□□□□□ -1.73
MSH1P25846 YGL204CYGL204C 306 nt4.26□□□□□ -1.73
MSH1P25846 YGR190CYGR190C 366 nt4.26□□□□□ -1.73
MSH1P25846 RSM27YGR215W 333 nt4.26□□□□□ -1.73
MSH1P25846 PXR1YGR280C 816 nt4.26□□□□□ -1.73
MSH1P25846 YAL034C-BYAL034C-B 354 nt4.26□□□□□ -1.73
MSH1P25846 MAP1YLR244C 1164 nt4.26□□□□□ -1.73
MSH1P25846 YMR310CYMR310C 954 nt4.26□□□□□ -1.73
MSH1P25846 YOL107WYOL107W 1029 nt4.26□□□□□ -1.73
MSH1P25846 HNT3YOR258W 654 nt4.26□□□□□ -1.73
MSH1P25846 YOR379CYOR379C 339 nt4.26□□□□□ -1.73
MSH1P25846 TAZ1YPR140W 1146 nt4.26□□□□□ -1.73
MSH1P25846 POF1YCL047C 777 nt4.26□□□□□ -1.73
MSH1P25846 YPR022CYPR022C 3402 nt4.26□□□□□ -1.73
MSH1P25846 YGL140CYGL140C 3660 nt4.26□□□□□ -1.73
MSH1P25846 YPL109CYPL109C 1974 nt4.25□□□□□ -1.73
MSH1P25846 TCO89YPL180W 2400 nt4.25□□□□□ -1.73
MSH1P25846 MCM7YBR202W 2538 nt4.25□□□□□ -1.73
MSH1P25846 RPN9YDR427W 1182 nt4.25□□□□□ -1.73
MSH1P25846 YGL188CYGL188C 174 nt4.25□□□□□ -1.73
MSH1P25846 RPC25YKL144C 639 nt4.25□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 36.1 ms