Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.21■□□□□ 0.51
COL8A2P25067 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.21■□□□□ 0.51
COL8A2P25067 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.21■□□□□ 0.51
COL8A2P25067 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
COL8A2P25067 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COL8A2P25067 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL8A2P25067 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL8A2P25067 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.21■□□□□ 0.51
COL8A2P25067 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL8A2P25067 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.5
COL8A2P25067 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL8A2P25067 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL8A2P25067 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL8A2P25067 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.2■□□□□ 0.5
COL8A2P25067 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
COL8A2P25067 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
COL8A2P25067 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.2■□□□□ 0.5
COL8A2P25067 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.2■□□□□ 0.5
COL8A2P25067 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.2■□□□□ 0.5
COL8A2P25067 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL8A2P25067 AC004854.2-201ENST00000608450 1441 ntBASIC18.2■□□□□ 0.5
COL8A2P25067 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL8A2P25067 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
COL8A2P25067 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.2■□□□□ 0.5
COL8A2P25067 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL8A2P25067 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL8A2P25067 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL8A2P25067 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
COL8A2P25067 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.19■□□□□ 0.5
COL8A2P25067 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL8A2P25067 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL8A2P25067 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL8A2P25067 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL8A2P25067 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.19■□□□□ 0.5
COL8A2P25067 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
COL8A2P25067 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.19■□□□□ 0.5
COL8A2P25067 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.19■□□□□ 0.5
COL8A2P25067 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.19■□□□□ 0.5
COL8A2P25067 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.19■□□□□ 0.5
COL8A2P25067 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.19■□□□□ 0.5
COL8A2P25067 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL8A2P25067 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL8A2P25067 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL8A2P25067 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL8A2P25067 AC005224.4-201ENST00000583262 1652 ntBASIC18.18■□□□□ 0.5
COL8A2P25067 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL8A2P25067 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.18■□□□□ 0.5
COL8A2P25067 AC012676.1-201ENST00000574705 1949 ntBASIC18.18■□□□□ 0.5
COL8A2P25067 AC009237.3-201ENST00000393279 1427 ntBASIC18.18■□□□□ 0.5
COL8A2P25067 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL8A2P25067 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
COL8A2P25067 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.18■□□□□ 0.5
COL8A2P25067 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.18■□□□□ 0.5
COL8A2P25067 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.18■□□□□ 0.5
COL8A2P25067 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.18■□□□□ 0.5
COL8A2P25067 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.18■□□□□ 0.5
COL8A2P25067 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.18■□□□□ 0.5
COL8A2P25067 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL8A2P25067 DUSP8P5-201ENST00000422884 1815 ntBASIC18.18■□□□□ 0.5
COL8A2P25067 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL8A2P25067 LINC00526-201ENST00000581067 1875 ntBASIC18.18■□□□□ 0.5
COL8A2P25067 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL8A2P25067 AC087742.1-201ENST00000575880 1738 ntBASIC18.18■□□□□ 0.5
COL8A2P25067 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.17■□□□□ 0.5
COL8A2P25067 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL8A2P25067 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.17■□□□□ 0.5
COL8A2P25067 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL8A2P25067 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL8A2P25067 AC079140.4-201ENST00000507448 529 ntBASIC18.17■□□□□ 0.5
COL8A2P25067 RARRES2P11-201ENST00000635158 484 ntBASIC18.17■□□□□ 0.5
COL8A2P25067 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL8A2P25067 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
COL8A2P25067 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL8A2P25067 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL8A2P25067 OR7E47P-201ENST00000546390 1422 ntBASIC18.16■□□□□ 0.5
COL8A2P25067 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL8A2P25067 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL8A2P25067 AP004607.7-201ENST00000527152 1677 ntBASIC18.16■□□□□ 0.5
COL8A2P25067 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL8A2P25067 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.16■□□□□ 0.5
COL8A2P25067 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL8A2P25067 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.16■□□□□ 0.5
COL8A2P25067 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.16■□□□□ 0.5
COL8A2P25067 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.16■□□□□ 0.5
COL8A2P25067 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.16■□□□□ 0.5
COL8A2P25067 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL8A2P25067 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL8A2P25067 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL8A2P25067 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL8A2P25067 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL8A2P25067 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL8A2P25067 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL8A2P25067 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL8A2P25067 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL8A2P25067 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL8A2P25067 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL8A2P25067 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL8A2P25067 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.15■□□□□ 0.5
COL8A2P25067 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL8A2P25067 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms