Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH3P22223 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH3P22223 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CDH3P22223 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.01■□□□□ 0.95
CDH3P22223 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH3P22223 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH3P22223 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH3P22223 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH3P22223 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH3P22223 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH3P22223 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21■□□□□ 0.95
CDH3P22223 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21■□□□□ 0.95
CDH3P22223 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDH3P22223 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21■□□□□ 0.95
CDH3P22223 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21■□□□□ 0.95
CDH3P22223 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH3P22223 ANKRD20A6P-201ENST00000618763 204 ntBASIC21■□□□□ 0.95
CDH3P22223 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH3P22223 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH3P22223 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH3P22223 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH3P22223 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH3P22223 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH3P22223 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.99■□□□□ 0.95
CDH3P22223 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH3P22223 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH3P22223 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.99■□□□□ 0.95
CDH3P22223 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH3P22223 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH3P22223 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH3P22223 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH3P22223 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH3P22223 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH3P22223 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.98■□□□□ 0.95
CDH3P22223 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.98■□□□□ 0.95
CDH3P22223 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.98■□□□□ 0.95
CDH3P22223 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDH3P22223 LINC01960-201ENST00000563759 1884 ntBASIC20.98■□□□□ 0.95
CDH3P22223 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH3P22223 OXCT2P1-201ENST00000447263 1535 ntBASIC20.98■□□□□ 0.95
CDH3P22223 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CDH3P22223 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH3P22223 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH3P22223 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH3P22223 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CDH3P22223 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDH3P22223 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH3P22223 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH3P22223 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.97■□□□□ 0.95
CDH3P22223 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.97■□□□□ 0.95
CDH3P22223 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH3P22223 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH3P22223 AC123595.1-201ENST00000440769 1046 ntBASIC20.97■□□□□ 0.95
CDH3P22223 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.97■□□□□ 0.95
CDH3P22223 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.97■□□□□ 0.95
CDH3P22223 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH3P22223 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.97■□□□□ 0.95
CDH3P22223 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH3P22223 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.97■□□□□ 0.95
CDH3P22223 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.97■□□□□ 0.95
CDH3P22223 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.97■□□□□ 0.95
CDH3P22223 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDH3P22223 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
CDH3P22223 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH3P22223 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH3P22223 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH3P22223 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH3P22223 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.96■□□□□ 0.95
CDH3P22223 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.96■□□□□ 0.95
CDH3P22223 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.96■□□□□ 0.95
CDH3P22223 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
CDH3P22223 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH3P22223 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH3P22223 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH3P22223 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
CDH3P22223 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH3P22223 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.95■□□□□ 0.94
CDH3P22223 AC034268.1-201ENST00000441047 882 ntBASIC20.95■□□□□ 0.94
CDH3P22223 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH3P22223 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH3P22223 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH3P22223 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH3P22223 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH3P22223 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDH3P22223 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH3P22223 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH3P22223 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDH3P22223 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.94■□□□□ 0.94
CDH3P22223 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CDH3P22223 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH3P22223 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDH3P22223 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CDH3P22223 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDH3P22223 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH3P22223 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH3P22223 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.93■□□□□ 0.94
CDH3P22223 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH3P22223 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH3P22223 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH3P22223 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms