Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCLP18206 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCLP18206 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VCLP18206 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCLP18206 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
VCLP18206 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.58■■□□□ 1.05
VCLP18206 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.58■■□□□ 1.05
VCLP18206 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.58■■□□□ 1.05
VCLP18206 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VCLP18206 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.58■■□□□ 1.04
VCLP18206 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
VCLP18206 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
VCLP18206 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
VCLP18206 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
VCLP18206 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
VCLP18206 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.57■■□□□ 1.04
VCLP18206 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
VCLP18206 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VCLP18206 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VCLP18206 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VCLP18206 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.57■■□□□ 1.04
VCLP18206 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
VCLP18206 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VCLP18206 TSPY26P-201ENST00000476365 1326 ntBASIC21.56■■□□□ 1.04
VCLP18206 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.56■■□□□ 1.04
VCLP18206 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.56■■□□□ 1.04
VCLP18206 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.56■■□□□ 1.04
VCLP18206 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.56■■□□□ 1.04
VCLP18206 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VCLP18206 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VCLP18206 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
VCLP18206 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.56■■□□□ 1.04
VCLP18206 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCLP18206 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
VCLP18206 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
VCLP18206 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCLP18206 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCLP18206 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
VCLP18206 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCLP18206 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VCLP18206 ZNRF2P3-201ENST00000424200 374 ntBASIC21.55■■□□□ 1.04
VCLP18206 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VCLP18206 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
VCLP18206 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VCLP18206 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
VCLP18206 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VCLP18206 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.55■■□□□ 1.04
VCLP18206 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCLP18206 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCLP18206 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCLP18206 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.55■■□□□ 1.04
VCLP18206 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
VCLP18206 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VCLP18206 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.55■■□□□ 1.04
VCLP18206 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.55■■□□□ 1.04
VCLP18206 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
VCLP18206 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VCLP18206 IRS3P-201ENST00000223076 1006 ntBASIC21.54■■□□□ 1.04
VCLP18206 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.54■■□□□ 1.04
VCLP18206 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.54■■□□□ 1.04
VCLP18206 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.54■■□□□ 1.04
VCLP18206 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VCLP18206 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
VCLP18206 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.54■■□□□ 1.04
VCLP18206 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VCLP18206 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VCLP18206 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
VCLP18206 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VCLP18206 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VCLP18206 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.53■■□□□ 1.04
VCLP18206 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
VCLP18206 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VCLP18206 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VCLP18206 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VCLP18206 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.53■■□□□ 1.04
VCLP18206 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VCLP18206 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VCLP18206 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VCLP18206 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VCLP18206 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VCLP18206 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.53■■□□□ 1.04
VCLP18206 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.52■■□□□ 1.04
VCLP18206 AC087742.1-201ENST00000575880 1738 ntBASIC21.52■■□□□ 1.04
VCLP18206 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.52■■□□□ 1.04
VCLP18206 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VCLP18206 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
VCLP18206 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
VCLP18206 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.52■■□□□ 1.04
VCLP18206 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.52■■□□□ 1.04
VCLP18206 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VCLP18206 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
VCLP18206 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
VCLP18206 LINC01960-201ENST00000563759 1884 ntBASIC21.52■■□□□ 1.03
VCLP18206 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.51■■□□□ 1.03
VCLP18206 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
VCLP18206 AC242852.2-201ENST00000615738 1807 ntBASIC21.51■■□□□ 1.03
VCLP18206 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.51■■□□□ 1.03
VCLP18206 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.51■■□□□ 1.03
VCLP18206 AL031602.1-201ENST00000633169 911 ntBASIC21.51■■□□□ 1.03
VCLP18206 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms