Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT4O95628 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT4O95628 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT4O95628 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.08■□□□□ 0.65
CNOT4O95628 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT4O95628 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
CNOT4O95628 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT4O95628 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT4O95628 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT4O95628 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CNOT4O95628 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.08■□□□□ 0.64
CNOT4O95628 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.08■□□□□ 0.64
CNOT4O95628 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.08■□□□□ 0.64
CNOT4O95628 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT4O95628 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
CNOT4O95628 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CNOT4O95628 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT4O95628 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.08■□□□□ 0.64
CNOT4O95628 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT4O95628 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT4O95628 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT4O95628 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
CNOT4O95628 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.07■□□□□ 0.64
CNOT4O95628 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CNOT4O95628 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT4O95628 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT4O95628 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CNOT4O95628 TPRG1LP1-201ENST00000598702 760 ntBASIC19.07■□□□□ 0.64
CNOT4O95628 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.07■□□□□ 0.64
CNOT4O95628 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT4O95628 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
CNOT4O95628 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT4O95628 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CNOT4O95628 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CNOT4O95628 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CNOT4O95628 KRT18P5-201ENST00000436075 1291 ntBASIC19.06■□□□□ 0.64
CNOT4O95628 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.06■□□□□ 0.64
CNOT4O95628 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT4O95628 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CNOT4O95628 AL034346.1-201ENST00000568244 1277 ntBASIC19.06■□□□□ 0.64
CNOT4O95628 TERF1P2-201ENST00000583350 1212 ntBASIC19.06■□□□□ 0.64
CNOT4O95628 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.06■□□□□ 0.64
CNOT4O95628 AC009237.3-201ENST00000393279 1427 ntBASIC19.06■□□□□ 0.64
CNOT4O95628 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT4O95628 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT4O95628 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT4O95628 AC087742.1-201ENST00000575880 1738 ntBASIC19.05■□□□□ 0.64
CNOT4O95628 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.05■□□□□ 0.64
CNOT4O95628 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNOT4O95628 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.05■□□□□ 0.64
CNOT4O95628 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT4O95628 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT4O95628 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.05■□□□□ 0.64
CNOT4O95628 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT4O95628 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CNOT4O95628 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.05■□□□□ 0.64
CNOT4O95628 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT4O95628 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.05■□□□□ 0.64
CNOT4O95628 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.05■□□□□ 0.64
CNOT4O95628 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.05■□□□□ 0.64
CNOT4O95628 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT4O95628 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT4O95628 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT4O95628 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT4O95628 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNOT4O95628 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CNOT4O95628 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.04■□□□□ 0.64
CNOT4O95628 AC079834.2-201ENST00000609776 1949 ntBASIC19.04■□□□□ 0.64
CNOT4O95628 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT4O95628 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.04■□□□□ 0.64
CNOT4O95628 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.04■□□□□ 0.64
CNOT4O95628 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT4O95628 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT4O95628 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.04■□□□□ 0.64
CNOT4O95628 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT4O95628 OR7E47P-201ENST00000546390 1422 ntBASIC19.04■□□□□ 0.64
CNOT4O95628 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.04■□□□□ 0.64
CNOT4O95628 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT4O95628 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT4O95628 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT4O95628 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT4O95628 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CNOT4O95628 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT4O95628 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT4O95628 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CNOT4O95628 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CNOT4O95628 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT4O95628 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.03■□□□□ 0.64
CNOT4O95628 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.03■□□□□ 0.64
CNOT4O95628 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CNOT4O95628 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT4O95628 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.03■□□□□ 0.64
CNOT4O95628 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT4O95628 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT4O95628 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CNOT4O95628 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CNOT4O95628 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT4O95628 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT4O95628 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT4O95628 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms