Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK3AO75631 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.3■□□□□ 0.68
UPK3AO75631 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPK3AO75631 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK3AO75631 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.3■□□□□ 0.68
UPK3AO75631 AP005435.1-201ENST00000529293 1178 ntBASIC19.3■□□□□ 0.68
UPK3AO75631 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK3AO75631 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.3■□□□□ 0.68
UPK3AO75631 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK3AO75631 RASA4CP-201ENST00000424092 1398 ntBASIC19.3■□□□□ 0.68
UPK3AO75631 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
UPK3AO75631 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK3AO75631 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPK3AO75631 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK3AO75631 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK3AO75631 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.29■□□□□ 0.68
UPK3AO75631 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
UPK3AO75631 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
UPK3AO75631 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK3AO75631 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.29■□□□□ 0.68
UPK3AO75631 AC091305.1-201ENST00000479476 895 ntBASIC19.29■□□□□ 0.68
UPK3AO75631 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UPK3AO75631 CA15P2-201ENST00000611168 834 ntBASIC19.29■□□□□ 0.68
UPK3AO75631 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.29■□□□□ 0.68
UPK3AO75631 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.29■□□□□ 0.68
UPK3AO75631 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK3AO75631 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK3AO75631 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.29■□□□□ 0.68
UPK3AO75631 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK3AO75631 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.29■□□□□ 0.68
UPK3AO75631 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
UPK3AO75631 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UPK3AO75631 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.28■□□□□ 0.68
UPK3AO75631 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPK3AO75631 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPK3AO75631 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.28■□□□□ 0.68
UPK3AO75631 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.28■□□□□ 0.68
UPK3AO75631 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPK3AO75631 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
UPK3AO75631 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UPK3AO75631 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPK3AO75631 AC010542.4-201ENST00000563151 1910 ntBASIC19.27■□□□□ 0.68
UPK3AO75631 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.27■□□□□ 0.68
UPK3AO75631 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.27■□□□□ 0.68
UPK3AO75631 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPK3AO75631 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPK3AO75631 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPK3AO75631 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.27■□□□□ 0.68
UPK3AO75631 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.27■□□□□ 0.68
UPK3AO75631 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
UPK3AO75631 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPK3AO75631 AC087239.1-201ENST00000622671 572 ntBASIC19.27■□□□□ 0.68
UPK3AO75631 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPK3AO75631 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.27■□□□□ 0.67
UPK3AO75631 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.26■□□□□ 0.67
UPK3AO75631 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPK3AO75631 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
UPK3AO75631 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPK3AO75631 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.26■□□□□ 0.67
UPK3AO75631 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.26■□□□□ 0.67
UPK3AO75631 AC010141.3-201ENST00000456659 717 ntBASIC19.26■□□□□ 0.67
UPK3AO75631 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.26■□□□□ 0.67
UPK3AO75631 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPK3AO75631 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPK3AO75631 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPK3AO75631 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.26■□□□□ 0.67
UPK3AO75631 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPK3AO75631 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
UPK3AO75631 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.25■□□□□ 0.67
UPK3AO75631 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPK3AO75631 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.25■□□□□ 0.67
UPK3AO75631 AC026310.3-201ENST00000625186 2373 ntBASIC19.25■□□□□ 0.67
UPK3AO75631 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPK3AO75631 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPK3AO75631 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPK3AO75631 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
UPK3AO75631 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPK3AO75631 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
UPK3AO75631 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.25■□□□□ 0.67
UPK3AO75631 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.25■□□□□ 0.67
UPK3AO75631 IGHV3-19-201ENST00000521488 291 ntBASIC19.25■□□□□ 0.67
UPK3AO75631 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.25■□□□□ 0.67
UPK3AO75631 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
UPK3AO75631 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPK3AO75631 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPK3AO75631 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPK3AO75631 TSPY26P-201ENST00000476365 1326 ntBASIC19.25■□□□□ 0.67
UPK3AO75631 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPK3AO75631 FAM99A-202ENST00000538190 1989 ntBASIC19.24■□□□□ 0.67
UPK3AO75631 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPK3AO75631 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UPK3AO75631 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPK3AO75631 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.24■□□□□ 0.67
UPK3AO75631 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.24■□□□□ 0.67
UPK3AO75631 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UPK3AO75631 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPK3AO75631 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.24■□□□□ 0.67
UPK3AO75631 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPK3AO75631 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPK3AO75631 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms