Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AP005435.1-201ENST00000529293 1178 ntBASIC20.76■□□□□ 0.91
CNOT3O75175 AC104564.3-201ENST00000582367 638 ntBASIC20.76■□□□□ 0.91
CNOT3O75175 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT3O75175 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT3O75175 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CNOT3O75175 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.76■□□□□ 0.91
CNOT3O75175 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.76■□□□□ 0.91
CNOT3O75175 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT3O75175 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT3O75175 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT3O75175 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CNOT3O75175 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT3O75175 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT3O75175 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT3O75175 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT3O75175 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CNOT3O75175 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT3O75175 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT3O75175 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.75■□□□□ 0.91
CNOT3O75175 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.75■□□□□ 0.91
CNOT3O75175 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.75■□□□□ 0.91
CNOT3O75175 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.75■□□□□ 0.91
CNOT3O75175 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.75■□□□□ 0.91
CNOT3O75175 YBX1P1-201ENST00000445822 960 ntBASIC20.75■□□□□ 0.91
CNOT3O75175 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT3O75175 AC012414.1-201ENST00000556676 535 ntBASIC20.75■□□□□ 0.91
CNOT3O75175 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT3O75175 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT3O75175 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CNOT3O75175 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT3O75175 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT3O75175 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.74■□□□□ 0.91
CNOT3O75175 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT3O75175 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.74■□□□□ 0.91
CNOT3O75175 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT3O75175 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT3O75175 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT3O75175 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.74■□□□□ 0.91
CNOT3O75175 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT3O75175 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.74■□□□□ 0.91
CNOT3O75175 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.74■□□□□ 0.91
CNOT3O75175 AL358852.1-201ENST00000623174 1268 ntBASIC20.74■□□□□ 0.91
CNOT3O75175 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT3O75175 AC137767.1-201ENST00000602918 1920 ntBASIC20.74■□□□□ 0.91
CNOT3O75175 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CNOT3O75175 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT3O75175 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT3O75175 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT3O75175 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT3O75175 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.73■□□□□ 0.91
CNOT3O75175 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT3O75175 AC027612.3-201ENST00000413684 1047 ntBASIC20.73■□□□□ 0.91
CNOT3O75175 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.73■□□□□ 0.91
CNOT3O75175 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CNOT3O75175 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT3O75175 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT3O75175 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT3O75175 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CNOT3O75175 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT3O75175 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CNOT3O75175 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT3O75175 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.72■□□□□ 0.91
CNOT3O75175 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.72■□□□□ 0.91
CNOT3O75175 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.72■□□□□ 0.91
CNOT3O75175 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT3O75175 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT3O75175 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.72■□□□□ 0.91
CNOT3O75175 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.72■□□□□ 0.91
CNOT3O75175 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT3O75175 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT3O75175 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.72■□□□□ 0.91
CNOT3O75175 LINC00526-201ENST00000581067 1875 ntBASIC20.71■□□□□ 0.91
CNOT3O75175 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CNOT3O75175 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT3O75175 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT3O75175 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT3O75175 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT3O75175 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT3O75175 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.71■□□□□ 0.91
CNOT3O75175 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT3O75175 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.71■□□□□ 0.91
CNOT3O75175 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.71■□□□□ 0.91
CNOT3O75175 AC127496.7-201ENST00000625110 1798 ntBASIC20.71■□□□□ 0.91
CNOT3O75175 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT3O75175 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT3O75175 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT3O75175 ANOS2P-203ENST00000472227 1816 ntBASIC20.71■□□□□ 0.91
CNOT3O75175 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT3O75175 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT3O75175 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CNOT3O75175 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT3O75175 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT3O75175 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.7■□□□□ 0.9
CNOT3O75175 DUX4L2-201ENST00000561772 1275 ntBASIC20.7■□□□□ 0.9
CNOT3O75175 AL354811.1-201ENST00000610286 706 ntBASIC20.7■□□□□ 0.9
CNOT3O75175 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
CNOT3O75175 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.7■□□□□ 0.9
CNOT3O75175 DUX4L6-201ENST00000626483 1275 ntBASIC20.7■□□□□ 0.9
CNOT3O75175 DUX4L1-201ENST00000627662 1275 ntBASIC20.7■□□□□ 0.9
CNOT3O75175 DUX4L8-201ENST00000629013 1275 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms