Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
TBC1D4O60343 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TBC1D4O60343 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
TBC1D4O60343 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.85■■□□□ 1.25
TBC1D4O60343 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TBC1D4O60343 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.85■■□□□ 1.25
TBC1D4O60343 AP004607.7-201ENST00000527152 1677 ntBASIC22.85■■□□□ 1.25
TBC1D4O60343 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
TBC1D4O60343 KRT18P11-201ENST00000435214 1283 ntBASIC22.85■■□□□ 1.25
TBC1D4O60343 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.85■■□□□ 1.25
TBC1D4O60343 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
TBC1D4O60343 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.85■■□□□ 1.25
TBC1D4O60343 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.85■■□□□ 1.25
TBC1D4O60343 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TBC1D4O60343 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
TBC1D4O60343 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TBC1D4O60343 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
TBC1D4O60343 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TBC1D4O60343 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TBC1D4O60343 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
TBC1D4O60343 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
TBC1D4O60343 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TBC1D4O60343 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.84■■□□□ 1.25
TBC1D4O60343 OR7E47P-201ENST00000546390 1422 ntBASIC22.84■■□□□ 1.25
TBC1D4O60343 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.84■■□□□ 1.25
TBC1D4O60343 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TBC1D4O60343 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TBC1D4O60343 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.83■■□□□ 1.25
TBC1D4O60343 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.83■■□□□ 1.25
TBC1D4O60343 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
TBC1D4O60343 AC026185.1-201ENST00000445748 174 ntBASIC22.83■■□□□ 1.25
TBC1D4O60343 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
TBC1D4O60343 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.83■■□□□ 1.25
TBC1D4O60343 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.83■■□□□ 1.25
TBC1D4O60343 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.83■■□□□ 1.25
TBC1D4O60343 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.83■■□□□ 1.25
TBC1D4O60343 AC011767.1-201ENST00000617410 1153 ntBASIC22.83■■□□□ 1.25
TBC1D4O60343 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TBC1D4O60343 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
TBC1D4O60343 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
TBC1D4O60343 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
TBC1D4O60343 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.82■■□□□ 1.24
TBC1D4O60343 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.82■■□□□ 1.24
TBC1D4O60343 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.82■■□□□ 1.24
TBC1D4O60343 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
TBC1D4O60343 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TBC1D4O60343 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.82■■□□□ 1.24
TBC1D4O60343 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TBC1D4O60343 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
TBC1D4O60343 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
TBC1D4O60343 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TBC1D4O60343 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.82■■□□□ 1.24
TBC1D4O60343 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.82■■□□□ 1.24
TBC1D4O60343 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TBC1D4O60343 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TBC1D4O60343 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TBC1D4O60343 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
TBC1D4O60343 AC137767.1-201ENST00000602918 1920 ntBASIC22.82■■□□□ 1.24
TBC1D4O60343 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TBC1D4O60343 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
TBC1D4O60343 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TBC1D4O60343 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TBC1D4O60343 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
TBC1D4O60343 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TBC1D4O60343 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.8■■□□□ 1.24
TBC1D4O60343 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.8■■□□□ 1.24
TBC1D4O60343 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.8■■□□□ 1.24
TBC1D4O60343 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
TBC1D4O60343 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TBC1D4O60343 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TBC1D4O60343 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TBC1D4O60343 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.8■■□□□ 1.24
TBC1D4O60343 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.8■■□□□ 1.24
TBC1D4O60343 CROCCP5-201ENST00000436658 830 ntBASIC22.8■■□□□ 1.24
TBC1D4O60343 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.8■■□□□ 1.24
TBC1D4O60343 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TBC1D4O60343 MFSD11-216ENST00000590393 1141 ntBASIC22.8■■□□□ 1.24
TBC1D4O60343 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
TBC1D4O60343 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.8■■□□□ 1.24
TBC1D4O60343 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TBC1D4O60343 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TBC1D4O60343 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
TBC1D4O60343 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TBC1D4O60343 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
TBC1D4O60343 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TBC1D4O60343 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TBC1D4O60343 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TBC1D4O60343 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
TBC1D4O60343 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TBC1D4O60343 HLA-L-209ENST00000420110 1011 ntBASIC22.79■■□□□ 1.24
TBC1D4O60343 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.79■■□□□ 1.24
TBC1D4O60343 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.79■■□□□ 1.24
TBC1D4O60343 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
TBC1D4O60343 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TBC1D4O60343 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.79■■□□□ 1.24
TBC1D4O60343 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TBC1D4O60343 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TBC1D4O60343 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TBC1D4O60343 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.78■■□□□ 1.24
TBC1D4O60343 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms