Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.75■□□□□ 0.91
PRICKLE3O43900 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PRICKLE3O43900 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.74■□□□□ 0.91
PRICKLE3O43900 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
PRICKLE3O43900 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE3O43900 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE3O43900 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE3O43900 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE3O43900 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE3O43900 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE3O43900 AC009237.3-201ENST00000393279 1427 ntBASIC20.74■□□□□ 0.91
PRICKLE3O43900 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.74■□□□□ 0.91
PRICKLE3O43900 TERF1P2-201ENST00000583350 1212 ntBASIC20.74■□□□□ 0.91
PRICKLE3O43900 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE3O43900 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE3O43900 AC092053.2-201ENST00000640557 1818 ntBASIC20.74■□□□□ 0.91
PRICKLE3O43900 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE3O43900 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE3O43900 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE3O43900 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE3O43900 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE3O43900 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 AL034346.1-201ENST00000568244 1277 ntBASIC20.73■□□□□ 0.91
PRICKLE3O43900 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 AC087623.3-201ENST00000607047 1098 ntBASIC20.73■□□□□ 0.91
PRICKLE3O43900 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE3O43900 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 AC005224.4-201ENST00000583262 1652 ntBASIC20.73■□□□□ 0.91
PRICKLE3O43900 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.73■□□□□ 0.91
PRICKLE3O43900 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE3O43900 LINC02228-203ENST00000641970 1355 ntBASIC20.72■□□□□ 0.91
PRICKLE3O43900 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE3O43900 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PRICKLE3O43900 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE3O43900 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.72■□□□□ 0.91
PRICKLE3O43900 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
PRICKLE3O43900 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.72■□□□□ 0.91
PRICKLE3O43900 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.72■□□□□ 0.91
PRICKLE3O43900 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE3O43900 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE3O43900 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE3O43900 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE3O43900 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.72■□□□□ 0.91
PRICKLE3O43900 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE3O43900 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.72■□□□□ 0.91
PRICKLE3O43900 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE3O43900 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE3O43900 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE3O43900 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PRICKLE3O43900 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE3O43900 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE3O43900 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE3O43900 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
PRICKLE3O43900 CCDC92B-201ENST00000575506 885 ntBASIC20.71■□□□□ 0.91
PRICKLE3O43900 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.71■□□□□ 0.91
PRICKLE3O43900 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PRICKLE3O43900 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE3O43900 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.71■□□□□ 0.91
PRICKLE3O43900 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PRICKLE3O43900 AC055733.4-201ENST00000638462 1354 ntBASIC20.71■□□□□ 0.91
PRICKLE3O43900 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PRICKLE3O43900 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.7■□□□□ 0.91
PRICKLE3O43900 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE3O43900 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE3O43900 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE3O43900 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE3O43900 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE3O43900 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE3O43900 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.7■□□□□ 0.9
PRICKLE3O43900 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.7■□□□□ 0.9
PRICKLE3O43900 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.7■□□□□ 0.9
PRICKLE3O43900 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.7■□□□□ 0.9
PRICKLE3O43900 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.7■□□□□ 0.9
PRICKLE3O43900 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE3O43900 AL117328.2-201ENST00000624617 1940 ntBASIC20.7■□□□□ 0.9
PRICKLE3O43900 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.7■□□□□ 0.9
PRICKLE3O43900 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.7■□□□□ 0.9
PRICKLE3O43900 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRICKLE3O43900 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRICKLE3O43900 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.69■□□□□ 0.9
PRICKLE3O43900 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.69■□□□□ 0.9
PRICKLE3O43900 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRICKLE3O43900 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRICKLE3O43900 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PRICKLE3O43900 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.69■□□□□ 0.9
PRICKLE3O43900 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.69■□□□□ 0.9
PRICKLE3O43900 DUX4L2-201ENST00000561772 1275 ntBASIC20.69■□□□□ 0.9
PRICKLE3O43900 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms