Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.64■□□□□ 0.73
COL6A6A6NMZ7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 AC010141.3-201ENST00000456659 717 ntBASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A6A6NMZ7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 AL445228.2-201ENST00000605589 952 ntBASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 AC012618.2-201ENST00000428058 849 ntBASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.62■□□□□ 0.73
COL6A6A6NMZ7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.61■□□□□ 0.73
COL6A6A6NMZ7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A6A6NMZ7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A6A6NMZ7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A6A6NMZ7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
COL6A6A6NMZ7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A6A6NMZ7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.61■□□□□ 0.73
COL6A6A6NMZ7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.61■□□□□ 0.73
COL6A6A6NMZ7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
COL6A6A6NMZ7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A6A6NMZ7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 REXO1L12P-201ENST00000622156 912 ntBASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 AL121749.1-202ENST00000609313 2153 ntBASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 AC055733.4-201ENST00000638462 1354 ntBASIC19.6■□□□□ 0.73
COL6A6A6NMZ7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL6A6A6NMZ7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL6A6A6NMZ7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL6A6A6NMZ7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.59■□□□□ 0.73
COL6A6A6NMZ7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL6A6A6NMZ7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL6A6A6NMZ7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL6A6A6NMZ7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.59■□□□□ 0.73
COL6A6A6NMZ7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
COL6A6A6NMZ7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL6A6A6NMZ7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.59■□□□□ 0.73
COL6A6A6NMZ7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL6A6A6NMZ7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL6A6A6NMZ7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL6A6A6NMZ7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.58■□□□□ 0.73
COL6A6A6NMZ7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
COL6A6A6NMZ7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.58■□□□□ 0.73
COL6A6A6NMZ7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.73
COL6A6A6NMZ7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.58■□□□□ 0.73
COL6A6A6NMZ7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
COL6A6A6NMZ7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.58■□□□□ 0.73
COL6A6A6NMZ7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.58■□□□□ 0.73
COL6A6A6NMZ7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.58■□□□□ 0.73
COL6A6A6NMZ7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL6A6A6NMZ7 AC022211.4-201ENST00000625094 2161 ntBASIC19.58■□□□□ 0.73
COL6A6A6NMZ7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL6A6A6NMZ7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL6A6A6NMZ7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL6A6A6NMZ7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL6A6A6NMZ7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
COL6A6A6NMZ7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.58■□□□□ 0.72
COL6A6A6NMZ7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.58■□□□□ 0.72
COL6A6A6NMZ7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms