Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.22■□□□□ 0.83
PRAMEF25A6NGN4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PRAMEF25A6NGN4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.21■□□□□ 0.83
PRAMEF25A6NGN4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
PRAMEF25A6NGN4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF25A6NGN4 BX842568.3-201ENST00000418104 571 ntBASIC20.21■□□□□ 0.83
PRAMEF25A6NGN4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.21■□□□□ 0.83
PRAMEF25A6NGN4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PRAMEF25A6NGN4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PRAMEF25A6NGN4 CA15P2-201ENST00000611168 834 ntBASIC20.21■□□□□ 0.83
PRAMEF25A6NGN4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF25A6NGN4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF25A6NGN4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF25A6NGN4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF25A6NGN4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 AC027682.1-201ENST00000562846 899 ntBASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 AC008764.7-201ENST00000593779 1081 ntBASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.2■□□□□ 0.82
PRAMEF25A6NGN4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 MIR939-201ENST00000401314 82 ntBASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 AC010525.1-201ENST00000585559 441 ntBASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 AC233992.3-201ENST00000607491 485 ntBASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF25A6NGN4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 AL024507.2-201ENST00000606070 2574 ntBASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 SUDS3P1-201ENST00000505831 966 ntBASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF25A6NGN4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 AC099791.1-201ENST00000416440 715 ntBASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 AC091305.1-201ENST00000479476 895 ntBASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF25A6NGN4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF25A6NGN4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.16■□□□□ 0.82
PRAMEF25A6NGN4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF25A6NGN4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PRAMEF25A6NGN4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF25A6NGN4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF25A6NGN4 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.16■□□□□ 0.82
PRAMEF25A6NGN4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF25A6NGN4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF25A6NGN4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF25A6NGN4 AL136967.2-201ENST00000623968 743 ntBASIC20.16■□□□□ 0.82
PRAMEF25A6NGN4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF25A6NGN4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF25A6NGN4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms