Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RPSAP5-201ENST00000485258 884 ntBASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 ELMOD2-206ENST00000511887 751 ntTSL 4 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 SAA2-SAA4-201ENST00000524555 743 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 SAA2-204ENST00000528349 948 ntTSL 2 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 ZNF175-203ENST00000545217 1239 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 TCAF2-204ENST00000441159 5568 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 SALL2-207ENST00000614342 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 LHFPL5-201ENST00000360215 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 SCAMP5-203ENST00000562212 3400 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 ELOVL1-202ENST00000413844 1451 ntTSL 2 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 EIF4E3-205ENST00000448225 6209 ntTSL 5 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 GPR26-201ENST00000284674 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 PRPF4-202ENST00000374199 3212 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 MASTL-201ENST00000342386 2968 ntTSL 2 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 OR2H2-201ENST00000383640 1514 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 SLC25A3-203ENST00000401722 6087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 RPL30-201ENST00000287038 543 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 CANT1-201ENST00000302345 3534 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 NDUFAF7-202ENST00000336237 1869 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 SOD1-202ENST00000389995 865 ntTSL 3 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AL139011.1-201ENST00000442130 557 ntTSL 2 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 RN7SL148P-201ENST00000467120 279 ntBASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 RPL18P1-201ENST00000497218 552 ntBASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AC104066.1-201ENST00000512377 751 ntBASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AC090095.1-201ENST00000519275 871 ntBASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AP002512.2-201ENST00000532561 623 ntBASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AL162464.2-201ENST00000557761 526 ntTSL 4 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 TLE3-213ENST00000558379 2304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AP000894.2-203ENST00000580612 439 ntTSL 3 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 KRT16P3-204ENST00000584759 681 ntTSL 5 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AKR1B1P7-201ENST00000587229 952 ntBASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AC090236.1-201ENST00000590318 768 ntTSL 2 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AC092120.3-201ENST00000605168 568 ntBASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AC021321.1-201ENST00000607397 1113 ntBASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 BID-211ENST00000611040 419 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 PCDHA4-204ENST00000618834 10557 ntBASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 PAX6-247ENST00000638965 979 ntTSL 5 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AGPAT3-203ENST00000398058 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 NLGN3-205ENST00000536169 3863 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 CDK14-202ENST00000380050 4995 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 FAIM2-201ENST00000320634 4654 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 TTC8-201ENST00000338104 2226 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 KYAT3-201ENST00000260508 2070 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 CEP57-210ENST00000538658 2084 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AC009927.1-201ENST00000510501 1779 ntBASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 NDRG4-254ENST00000569923 1312 ntTSL 2 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 RAD51C-201ENST00000337432 2591 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 GP6-203ENST00000417454 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 GATAD2B-201ENST00000368655 7478 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 TMEM100-205ENST00000575734 1962 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 OSBPL9-207ENST00000462759 2755 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 CELF2-210ENST00000631816 1803 ntTSL 2 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC11.05□□□□□ -0.64
NPIPA3F8WFD2 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 PPP6R3-204ENST00000393801 5069 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 C1S-203ENST00000402681 2522 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms