Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn9Q9Z0S7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cldn9Q9Z0S7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn9Q9Z0S7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn9Q9Z0S7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cldn9Q9Z0S7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.37■□□□□ 0.53
Cldn9Q9Z0S7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn9Q9Z0S7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn9Q9Z0S7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn9Q9Z0S7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn9Q9Z0S7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.36■□□□□ 0.53
Cldn9Q9Z0S7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Cldn9Q9Z0S7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn9Q9Z0S7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.36■□□□□ 0.53
Cldn9Q9Z0S7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn9Q9Z0S7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn9Q9Z0S7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cldn9Q9Z0S7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn9Q9Z0S7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Cldn9Q9Z0S7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn9Q9Z0S7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn9Q9Z0S7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn9Q9Z0S7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn9Q9Z0S7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn9Q9Z0S7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.35■□□□□ 0.53
Cldn9Q9Z0S7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn9Q9Z0S7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn9Q9Z0S7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cldn9Q9Z0S7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.35■□□□□ 0.53
Cldn9Q9Z0S7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn9Q9Z0S7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn9Q9Z0S7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cldn9Q9Z0S7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn9Q9Z0S7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn9Q9Z0S7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn9Q9Z0S7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn9Q9Z0S7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn9Q9Z0S7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn9Q9Z0S7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.34■□□□□ 0.53
Cldn9Q9Z0S7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Cldn9Q9Z0S7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn9Q9Z0S7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.34■□□□□ 0.53
Cldn9Q9Z0S7 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.34■□□□□ 0.53
Cldn9Q9Z0S7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn9Q9Z0S7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn9Q9Z0S7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cldn9Q9Z0S7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn9Q9Z0S7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Cldn9Q9Z0S7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn9Q9Z0S7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.33■□□□□ 0.53
Cldn9Q9Z0S7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn9Q9Z0S7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cldn9Q9Z0S7 Gm27801-201ENSMUST00000184174 223 ntBASIC18.33■□□□□ 0.52
Cldn9Q9Z0S7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn9Q9Z0S7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn9Q9Z0S7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cldn9Q9Z0S7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn9Q9Z0S7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn9Q9Z0S7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cldn9Q9Z0S7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn9Q9Z0S7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Gm26833-201ENSMUST00000180899 440 ntBASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn9Q9Z0S7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms