Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA2Q9Y5H9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHA2Q9Y5H9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDHA2Q9Y5H9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
PCDHA2Q9Y5H9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDHA2Q9Y5H9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
PCDHA2Q9Y5H9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
PCDHA2Q9Y5H9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 AC010141.3-201ENST00000456659 717 ntBASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA2Q9Y5H9 AC080038.3-201ENST00000623346 1952 ntBASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 AC087239.1-201ENST00000622671 572 ntBASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHA2Q9Y5H9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 TPRG1LP1-201ENST00000598702 760 ntBASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 AL137784.2-201ENST00000607332 1000 ntBASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 AC092437.1-201ENST00000624794 1048 ntBASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 ECEL1P1-201ENST00000373592 1742 ntBASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA2Q9Y5H9 EP400NL-214ENST00000641289 2402 ntBASIC24.25■■□□□ 1.47
PCDHA2Q9Y5H9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA2Q9Y5H9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHA2Q9Y5H9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA2Q9Y5H9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA2Q9Y5H9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA2Q9Y5H9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA2Q9Y5H9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA2Q9Y5H9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
PCDHA2Q9Y5H9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA2Q9Y5H9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
PCDHA2Q9Y5H9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA2Q9Y5H9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA2Q9Y5H9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA2Q9Y5H9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA2Q9Y5H9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA2Q9Y5H9 AC139530.1-201ENST00000575312 1977 ntBASIC24.24■■□□□ 1.47
PCDHA2Q9Y5H9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA2Q9Y5H9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.24■■□□□ 1.47
PCDHA2Q9Y5H9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA2Q9Y5H9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHA2Q9Y5H9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDHA2Q9Y5H9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
PCDHA2Q9Y5H9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA2Q9Y5H9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA2Q9Y5H9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHA2Q9Y5H9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA2Q9Y5H9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA2Q9Y5H9 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.23■■□□□ 1.47
PCDHA2Q9Y5H9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
PCDHA2Q9Y5H9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA2Q9Y5H9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDHA2Q9Y5H9 AC242852.2-201ENST00000615738 1807 ntBASIC24.23■■□□□ 1.47
PCDHA2Q9Y5H9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA2Q9Y5H9 AC137767.1-201ENST00000602918 1920 ntBASIC24.23■■□□□ 1.47
PCDHA2Q9Y5H9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA2Q9Y5H9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA2Q9Y5H9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms