Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 IGHV3-19-201ENST00000521488 291 ntBASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 DUX4L2-201ENST00000561772 1275 ntBASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 DUX4L6-201ENST00000626483 1275 ntBASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 DUX4L1-201ENST00000627662 1275 ntBASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 DUX4L8-201ENST00000629013 1275 ntBASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 DUX4L3-201ENST00000630187 1275 ntBASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 DUX4L7-201ENST00000630678 1275 ntBASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 DUX4L5-201ENST00000630834 1275 ntBASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHGA7Q9Y5G6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 C11orf96-202ENST00000528572 1834 ntBASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGA7Q9Y5G6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 AC092053.2-201ENST00000640557 1818 ntBASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 MIR572-201ENST00000384983 95 ntBASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
PCDHGA7Q9Y5G6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 AL354811.1-201ENST00000610286 706 ntBASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA7Q9Y5G6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA7Q9Y5G6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA7Q9Y5G6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PCDHGA7Q9Y5G6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCDHGA7Q9Y5G6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA7Q9Y5G6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA7Q9Y5G6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHGA7Q9Y5G6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.35■■□□□ 1.01
PCDHGA7Q9Y5G6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
PCDHGA7Q9Y5G6 AC092437.1-201ENST00000624794 1048 ntBASIC21.35■■□□□ 1.01
PCDHGA7Q9Y5G6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGA7Q9Y5G6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PCDHGA7Q9Y5G6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA7Q9Y5G6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA7Q9Y5G6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA7Q9Y5G6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHGA7Q9Y5G6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHGA7Q9Y5G6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
PCDHGA7Q9Y5G6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 534.2 ms