Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC4Q9Y5F7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC4Q9Y5F7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC4Q9Y5F7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHGC4Q9Y5F7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.83■■□□□ 1.09
PCDHGC4Q9Y5F7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC4Q9Y5F7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGC4Q9Y5F7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGC4Q9Y5F7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC4Q9Y5F7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC4Q9Y5F7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGC4Q9Y5F7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGC4Q9Y5F7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.83■■□□□ 1.08
PCDHGC4Q9Y5F7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
PCDHGC4Q9Y5F7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGC4Q9Y5F7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.83■■□□□ 1.08
PCDHGC4Q9Y5F7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGC4Q9Y5F7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGC4Q9Y5F7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHGC4Q9Y5F7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
PCDHGC4Q9Y5F7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGC4Q9Y5F7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGC4Q9Y5F7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 AC242852.2-201ENST00000615738 1807 ntBASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC4Q9Y5F7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 AL117328.2-201ENST00000624617 1940 ntBASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGC4Q9Y5F7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGC4Q9Y5F7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PCDHGC4Q9Y5F7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGC4Q9Y5F7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGC4Q9Y5F7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGC4Q9Y5F7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGC4Q9Y5F7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHGC4Q9Y5F7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGC4Q9Y5F7 BX005040.4-201ENST00000637145 1518 ntBASIC21.78■■□□□ 1.08
PCDHGC4Q9Y5F7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHGC4Q9Y5F7 AP004607.7-201ENST00000527152 1677 ntBASIC21.78■■□□□ 1.08
PCDHGC4Q9Y5F7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGC4Q9Y5F7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGC4Q9Y5F7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 MIR935-201ENST00000401179 91 ntBASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 AC027612.3-201ENST00000413684 1047 ntBASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms