Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRIT1Q9P2V4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRIT1Q9P2V4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRIT1Q9P2V4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LRIT1Q9P2V4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LRIT1Q9P2V4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRIT1Q9P2V4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.95■□□□□ 0.94
LRIT1Q9P2V4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.95■□□□□ 0.94
LRIT1Q9P2V4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LRIT1Q9P2V4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.95■□□□□ 0.94
LRIT1Q9P2V4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRIT1Q9P2V4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.94■□□□□ 0.94
LRIT1Q9P2V4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRIT1Q9P2V4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRIT1Q9P2V4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRIT1Q9P2V4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRIT1Q9P2V4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRIT1Q9P2V4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.94■□□□□ 0.94
LRIT1Q9P2V4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRIT1Q9P2V4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRIT1Q9P2V4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.94■□□□□ 0.94
LRIT1Q9P2V4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.94■□□□□ 0.94
LRIT1Q9P2V4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRIT1Q9P2V4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
LRIT1Q9P2V4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
LRIT1Q9P2V4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRIT1Q9P2V4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRIT1Q9P2V4 KRT18P11-201ENST00000435214 1283 ntBASIC20.93■□□□□ 0.94
LRIT1Q9P2V4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.93■□□□□ 0.94
LRIT1Q9P2V4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.93■□□□□ 0.94
LRIT1Q9P2V4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.93■□□□□ 0.94
LRIT1Q9P2V4 RAP2CP1-201ENST00000605103 478 ntBASIC20.93■□□□□ 0.94
LRIT1Q9P2V4 KRT87P-202ENST00000534226 1464 ntBASIC20.93■□□□□ 0.94
LRIT1Q9P2V4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRIT1Q9P2V4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 AC026185.1-201ENST00000445748 174 ntBASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 AC104187.1-201ENST00000607510 612 ntBASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LRIT1Q9P2V4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 HLA-L-209ENST00000420110 1011 ntBASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 AC011767.1-201ENST00000617410 1153 ntBASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT1Q9P2V4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT1Q9P2V4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT1Q9P2V4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT1Q9P2V4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LRIT1Q9P2V4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT1Q9P2V4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.9■□□□□ 0.94
LRIT1Q9P2V4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT1Q9P2V4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.9■□□□□ 0.94
LRIT1Q9P2V4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.9■□□□□ 0.94
LRIT1Q9P2V4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT1Q9P2V4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT1Q9P2V4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT1Q9P2V4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT1Q9P2V4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT1Q9P2V4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
LRIT1Q9P2V4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRIT1Q9P2V4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.89■□□□□ 0.93
LRIT1Q9P2V4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.89■□□□□ 0.93
LRIT1Q9P2V4 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.89■□□□□ 0.93
LRIT1Q9P2V4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.89■□□□□ 0.93
LRIT1Q9P2V4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LRIT1Q9P2V4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRIT1Q9P2V4 AP004607.7-201ENST00000527152 1677 ntBASIC20.89■□□□□ 0.93
LRIT1Q9P2V4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
LRIT1Q9P2V4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRIT1Q9P2V4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LRIT1Q9P2V4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRIT1Q9P2V4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
LRIT1Q9P2V4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
LRIT1Q9P2V4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LRIT1Q9P2V4 DUSP8P5-201ENST00000422884 1815 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms