Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF2Q9P2I0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.65■■□□□ 1.06
CPSF2Q9P2I0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.65■■□□□ 1.06
CPSF2Q9P2I0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CPSF2Q9P2I0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CPSF2Q9P2I0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.65■■□□□ 1.06
CPSF2Q9P2I0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CPSF2Q9P2I0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF2Q9P2I0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.65■■□□□ 1.06
CPSF2Q9P2I0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.65■■□□□ 1.06
CPSF2Q9P2I0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.65■■□□□ 1.06
CPSF2Q9P2I0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CPSF2Q9P2I0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF2Q9P2I0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPSF2Q9P2I0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPSF2Q9P2I0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CPSF2Q9P2I0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF2Q9P2I0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CPSF2Q9P2I0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF2Q9P2I0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CPSF2Q9P2I0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF2Q9P2I0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF2Q9P2I0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.63■■□□□ 1.05
CPSF2Q9P2I0 AL451085.2-201ENST00000605085 799 ntBASIC21.63■■□□□ 1.05
CPSF2Q9P2I0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.63■■□□□ 1.05
CPSF2Q9P2I0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF2Q9P2I0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF2Q9P2I0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF2Q9P2I0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CPSF2Q9P2I0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF2Q9P2I0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
CPSF2Q9P2I0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPSF2Q9P2I0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.62■■□□□ 1.05
CPSF2Q9P2I0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.62■■□□□ 1.05
CPSF2Q9P2I0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPSF2Q9P2I0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPSF2Q9P2I0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.62■■□□□ 1.05
CPSF2Q9P2I0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CPSF2Q9P2I0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPSF2Q9P2I0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF2Q9P2I0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF2Q9P2I0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF2Q9P2I0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF2Q9P2I0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF2Q9P2I0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.6■■□□□ 1.05
CPSF2Q9P2I0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.6■■□□□ 1.05
CPSF2Q9P2I0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.6■■□□□ 1.05
CPSF2Q9P2I0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
CPSF2Q9P2I0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF2Q9P2I0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF2Q9P2I0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF2Q9P2I0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF2Q9P2I0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF2Q9P2I0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.59■■□□□ 1.05
CPSF2Q9P2I0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF2Q9P2I0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
CPSF2Q9P2I0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF2Q9P2I0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.59■■□□□ 1.05
CPSF2Q9P2I0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.59■■□□□ 1.05
CPSF2Q9P2I0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
CPSF2Q9P2I0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.59■■□□□ 1.05
CPSF2Q9P2I0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF2Q9P2I0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.59■■□□□ 1.05
CPSF2Q9P2I0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CPSF2Q9P2I0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF2Q9P2I0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF2Q9P2I0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CPSF2Q9P2I0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPSF2Q9P2I0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms