Protein–RNA interactions for Protein: Q9NRJ4

TULP4, Tubby-related protein 4, humanhuman

Predictions only

Length 1,543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4Q9NRJ4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC30.15■■■□□ 2.42
TULP4Q9NRJ4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC30.15■■■□□ 2.42
TULP4Q9NRJ4 AC142086.2-201ENST00000569753 217 ntBASIC30.15■■■□□ 2.42
TULP4Q9NRJ4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC30.15■■■□□ 2.42
TULP4Q9NRJ4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC30.15■■■□□ 2.42
TULP4Q9NRJ4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
TULP4Q9NRJ4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
TULP4Q9NRJ4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC30.14■■■□□ 2.42
TULP4Q9NRJ4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC30.14■■■□□ 2.42
TULP4Q9NRJ4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC30.14■■■□□ 2.42
TULP4Q9NRJ4 MDK-213ENST00000617138 635 ntTSL 2 BASIC30.14■■■□□ 2.42
TULP4Q9NRJ4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
TULP4Q9NRJ4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TULP4Q9NRJ4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TULP4Q9NRJ4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC30.13■■■□□ 2.41
TULP4Q9NRJ4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC30.13■■■□□ 2.41
TULP4Q9NRJ4 SLC7A5P2-201ENST00000553010 536 ntBASIC30.13■■■□□ 2.41
TULP4Q9NRJ4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC30.13■■■□□ 2.41
TULP4Q9NRJ4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
TULP4Q9NRJ4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC30.13■■■□□ 2.41
TULP4Q9NRJ4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
TULP4Q9NRJ4 AC009237.3-201ENST00000393279 1427 ntBASIC30.12■■■□□ 2.41
TULP4Q9NRJ4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TULP4Q9NRJ4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
TULP4Q9NRJ4 DUX4L16-201ENST00000555130 1264 ntBASIC30.12■■■□□ 2.41
TULP4Q9NRJ4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC30.11■■■□□ 2.41
TULP4Q9NRJ4 AC055733.4-201ENST00000638462 1354 ntBASIC30.11■■■□□ 2.41
TULP4Q9NRJ4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC30.11■■■□□ 2.41
TULP4Q9NRJ4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TULP4Q9NRJ4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC30.11■■■□□ 2.41
TULP4Q9NRJ4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
TULP4Q9NRJ4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
TULP4Q9NRJ4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TULP4Q9NRJ4 GPX1P1-201ENST00000388829 606 ntBASIC30.11■■■□□ 2.41
TULP4Q9NRJ4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC30.11■■■□□ 2.41
TULP4Q9NRJ4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC30.11■■■□□ 2.41
TULP4Q9NRJ4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC30.1■■■□□ 2.41
TULP4Q9NRJ4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TULP4Q9NRJ4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC30.1■■■□□ 2.41
TULP4Q9NRJ4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
TULP4Q9NRJ4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC30.1■■■□□ 2.41
TULP4Q9NRJ4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC30.09■■■□□ 2.41
TULP4Q9NRJ4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC30.09■■■□□ 2.41
TULP4Q9NRJ4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
TULP4Q9NRJ4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC30.09■■■□□ 2.41
TULP4Q9NRJ4 MYCNOS-205ENST00000641950 531 ntBASIC30.09■■■□□ 2.41
TULP4Q9NRJ4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
TULP4Q9NRJ4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
TULP4Q9NRJ4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC30.08■■■□□ 2.41
TULP4Q9NRJ4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC30.08■■■□□ 2.41
TULP4Q9NRJ4 AC079089.2-201ENST00000531211 1277 ntBASIC30.08■■■□□ 2.41
TULP4Q9NRJ4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC30.08■■■□□ 2.41
TULP4Q9NRJ4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
TULP4Q9NRJ4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC30.08■■■□□ 2.41
TULP4Q9NRJ4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
TULP4Q9NRJ4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 AC231657.2-201ENST00000624556 255 ntBASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC30.07■■■□□ 2.4
TULP4Q9NRJ4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 APTR-205ENST00000447009 902 ntTSL 2 BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 LINC00526-201ENST00000581067 1875 ntBASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TULP4Q9NRJ4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TULP4Q9NRJ4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC30.05■■■□□ 2.4
TULP4Q9NRJ4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC30.05■■■□□ 2.4
TULP4Q9NRJ4 AL121832.2-201ENST00000610979 668 ntBASIC30.05■■■□□ 2.4
TULP4Q9NRJ4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
TULP4Q9NRJ4 TSPY6P-201ENST00000448518 926 ntBASIC30.04■■■□□ 2.4
TULP4Q9NRJ4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC30.04■■■□□ 2.4
TULP4Q9NRJ4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC30.04■■■□□ 2.4
TULP4Q9NRJ4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC30.04■■■□□ 2.4
TULP4Q9NRJ4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
TULP4Q9NRJ4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
TULP4Q9NRJ4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
TULP4Q9NRJ4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC30.04■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms