Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDH23Q9H251 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.27■■□□□ 1.32
CDH23Q9H251 AC073648.6-201ENST00000641589 218 ntBASIC23.27■■□□□ 1.32
CDH23Q9H251 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDH23Q9H251 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDH23Q9H251 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDH23Q9H251 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CDH23Q9H251 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CDH23Q9H251 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDH23Q9H251 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDH23Q9H251 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.27■■□□□ 1.31
CDH23Q9H251 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
CDH23Q9H251 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDH23Q9H251 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDH23Q9H251 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDH23Q9H251 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDH23Q9H251 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDH23Q9H251 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.26■■□□□ 1.31
CDH23Q9H251 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
CDH23Q9H251 AC068338.2-201ENST00000563278 1430 ntBASIC23.26■■□□□ 1.31
CDH23Q9H251 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDH23Q9H251 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.26■■□□□ 1.31
CDH23Q9H251 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CDH23Q9H251 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDH23Q9H251 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CDH23Q9H251 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDH23Q9H251 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDH23Q9H251 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDH23Q9H251 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDH23Q9H251 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDH23Q9H251 DUSP8P4-201ENST00000399538 1761 ntBASIC23.25■■□□□ 1.31
CDH23Q9H251 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.25■■□□□ 1.31
CDH23Q9H251 LINC01023-201ENST00000606054 436 ntBASIC23.25■■□□□ 1.31
CDH23Q9H251 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDH23Q9H251 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.25■■□□□ 1.31
CDH23Q9H251 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDH23Q9H251 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDH23Q9H251 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDH23Q9H251 FP325331.1-202ENST00000623531 1380 ntBASIC23.24■■□□□ 1.31
CDH23Q9H251 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH23Q9H251 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH23Q9H251 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDH23Q9H251 AC010536.3-201ENST00000620306 533 ntBASIC23.24■■□□□ 1.31
CDH23Q9H251 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH23Q9H251 AL161729.1-201ENST00000604104 1402 ntBASIC23.24■■□□□ 1.31
CDH23Q9H251 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.24■■□□□ 1.31
CDH23Q9H251 AC093787.1-201ENST00000450396 207 ntBASIC23.24■■□□□ 1.31
CDH23Q9H251 AC007322.4-201ENST00000509611 723 ntBASIC23.24■■□□□ 1.31
CDH23Q9H251 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDH23Q9H251 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDH23Q9H251 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDH23Q9H251 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CDH23Q9H251 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.23■■□□□ 1.31
CDH23Q9H251 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.23■■□□□ 1.31
CDH23Q9H251 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.23■■□□□ 1.31
CDH23Q9H251 AC013268.1-206ENST00000638368 961 ntBASIC23.23■■□□□ 1.31
CDH23Q9H251 AC112229.1-201ENST00000639295 961 ntBASIC23.23■■□□□ 1.31
CDH23Q9H251 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDH23Q9H251 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CDH23Q9H251 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.23■■□□□ 1.31
CDH23Q9H251 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CDH23Q9H251 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.23■■□□□ 1.31
CDH23Q9H251 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CDH23Q9H251 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.23■■□□□ 1.31
CDH23Q9H251 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDH23Q9H251 AC079630.1-202ENST00000618127 1840 ntBASIC23.22■■□□□ 1.31
CDH23Q9H251 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.22■■□□□ 1.31
CDH23Q9H251 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
CDH23Q9H251 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.22■■□□□ 1.31
CDH23Q9H251 AC005224.4-201ENST00000583262 1652 ntBASIC23.22■■□□□ 1.31
CDH23Q9H251 AC026366.1-201ENST00000488803 879 ntBASIC23.22■■□□□ 1.31
CDH23Q9H251 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.22■■□□□ 1.31
CDH23Q9H251 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDH23Q9H251 AL353803.4-201ENST00000565882 1934 ntBASIC23.22■■□□□ 1.31
CDH23Q9H251 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDH23Q9H251 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.22■■□□□ 1.31
CDH23Q9H251 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.21■■□□□ 1.31
CDH23Q9H251 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.21■■□□□ 1.31
CDH23Q9H251 AC142381.4-202ENST00000563973 229 ntBASIC23.21■■□□□ 1.31
CDH23Q9H251 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDH23Q9H251 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDH23Q9H251 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
CDH23Q9H251 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.21■■□□□ 1.31
CDH23Q9H251 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC23.21■■□□□ 1.31
CDH23Q9H251 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDH23Q9H251 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDH23Q9H251 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDH23Q9H251 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.21■■□□□ 1.31
CDH23Q9H251 LINC00543-201ENST00000567234 1845 ntBASIC23.2■■□□□ 1.31
CDH23Q9H251 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDH23Q9H251 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDH23Q9H251 UNC93B5-201ENST00000530315 699 ntBASIC23.2■■□□□ 1.3
CDH23Q9H251 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDH23Q9H251 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDH23Q9H251 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.2■■□□□ 1.3
CDH23Q9H251 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDH23Q9H251 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.2■■□□□ 1.3
CDH23Q9H251 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CDH23Q9H251 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDH23Q9H251 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms