Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
NOTCH4Q99466 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NOTCH4Q99466 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
NOTCH4Q99466 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NOTCH4Q99466 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NOTCH4Q99466 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.52■■□□□ 1.2
NOTCH4Q99466 AC098934.4-201ENST00000564127 592 ntBASIC22.52■■□□□ 1.2
NOTCH4Q99466 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.52■■□□□ 1.2
NOTCH4Q99466 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.52■■□□□ 1.2
NOTCH4Q99466 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.52■■□□□ 1.2
NOTCH4Q99466 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.52■■□□□ 1.2
NOTCH4Q99466 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NOTCH4Q99466 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.52■■□□□ 1.2
NOTCH4Q99466 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.52■■□□□ 1.2
NOTCH4Q99466 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.52■■□□□ 1.19
NOTCH4Q99466 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.52■■□□□ 1.19
NOTCH4Q99466 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.52■■□□□ 1.19
NOTCH4Q99466 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NOTCH4Q99466 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NOTCH4Q99466 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NOTCH4Q99466 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
NOTCH4Q99466 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
NOTCH4Q99466 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
NOTCH4Q99466 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NOTCH4Q99466 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.51■■□□□ 1.19
NOTCH4Q99466 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
NOTCH4Q99466 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NOTCH4Q99466 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NOTCH4Q99466 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.51■■□□□ 1.19
NOTCH4Q99466 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.51■■□□□ 1.19
NOTCH4Q99466 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NOTCH4Q99466 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NOTCH4Q99466 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NOTCH4Q99466 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NOTCH4Q99466 AC079089.2-201ENST00000531211 1277 ntBASIC22.5■■□□□ 1.19
NOTCH4Q99466 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.5■■□□□ 1.19
NOTCH4Q99466 AC138907.5-202ENST00000569484 235 ntBASIC22.5■■□□□ 1.19
NOTCH4Q99466 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.5■■□□□ 1.19
NOTCH4Q99466 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NOTCH4Q99466 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NOTCH4Q99466 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NOTCH4Q99466 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
NOTCH4Q99466 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NOTCH4Q99466 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.5■■□□□ 1.19
NOTCH4Q99466 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
NOTCH4Q99466 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NOTCH4Q99466 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.5■■□□□ 1.19
NOTCH4Q99466 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.5■■□□□ 1.19
NOTCH4Q99466 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.5■■□□□ 1.19
NOTCH4Q99466 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.5■■□□□ 1.19
NOTCH4Q99466 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NOTCH4Q99466 AP004607.7-201ENST00000527152 1677 ntBASIC22.49■■□□□ 1.19
NOTCH4Q99466 LINC00526-201ENST00000581067 1875 ntBASIC22.49■■□□□ 1.19
NOTCH4Q99466 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.49■■□□□ 1.19
NOTCH4Q99466 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.49■■□□□ 1.19
NOTCH4Q99466 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.49■■□□□ 1.19
NOTCH4Q99466 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
NOTCH4Q99466 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NOTCH4Q99466 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NOTCH4Q99466 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NOTCH4Q99466 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
NOTCH4Q99466 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NOTCH4Q99466 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NOTCH4Q99466 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NOTCH4Q99466 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NOTCH4Q99466 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.48■■□□□ 1.19
NOTCH4Q99466 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
NOTCH4Q99466 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NOTCH4Q99466 AC010141.2-201ENST00000452426 721 ntBASIC22.47■■□□□ 1.19
NOTCH4Q99466 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NOTCH4Q99466 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NOTCH4Q99466 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.47■■□□□ 1.19
NOTCH4Q99466 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
NOTCH4Q99466 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
NOTCH4Q99466 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
NOTCH4Q99466 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.47■■□□□ 1.19
NOTCH4Q99466 AL138781.1-201ENST00000566567 1274 ntBASIC22.47■■□□□ 1.19
NOTCH4Q99466 AL121832.2-201ENST00000610979 668 ntBASIC22.47■■□□□ 1.19
NOTCH4Q99466 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.47■■□□□ 1.19
NOTCH4Q99466 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.46■■□□□ 1.19
NOTCH4Q99466 AF201337.1-201ENST00000520239 748 ntBASIC22.46■■□□□ 1.19
NOTCH4Q99466 KRT18P20-201ENST00000548986 1279 ntBASIC22.46■■□□□ 1.19
NOTCH4Q99466 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.46■■□□□ 1.19
NOTCH4Q99466 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NOTCH4Q99466 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
NOTCH4Q99466 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NOTCH4Q99466 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.45■■□□□ 1.18
NOTCH4Q99466 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.45■■□□□ 1.18
NOTCH4Q99466 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
NOTCH4Q99466 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NOTCH4Q99466 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NOTCH4Q99466 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
NOTCH4Q99466 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NOTCH4Q99466 TSPY6P-201ENST00000448518 926 ntBASIC22.45■■□□□ 1.18
NOTCH4Q99466 MIR4651-201ENST00000582622 73 ntBASIC22.45■■□□□ 1.18
NOTCH4Q99466 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.45■■□□□ 1.18
NOTCH4Q99466 AP001160.3-201ENST00000601484 763 ntBASIC22.45■■□□□ 1.18
NOTCH4Q99466 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NOTCH4Q99466 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NOTCH4Q99466 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms