Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPG11Q96JI7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPG11Q96JI7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.45■□□□□ 0.54
SPG11Q96JI7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.45■□□□□ 0.54
SPG11Q96JI7 AC145676.1-201ENST00000514988 2004 ntBASIC18.45■□□□□ 0.54
SPG11Q96JI7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPG11Q96JI7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SPG11Q96JI7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.45■□□□□ 0.54
SPG11Q96JI7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.44■□□□□ 0.54
SPG11Q96JI7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPG11Q96JI7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPG11Q96JI7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPG11Q96JI7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
SPG11Q96JI7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SPG11Q96JI7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.44■□□□□ 0.54
SPG11Q96JI7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPG11Q96JI7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SPG11Q96JI7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPG11Q96JI7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.44■□□□□ 0.54
SPG11Q96JI7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SPG11Q96JI7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.44■□□□□ 0.54
SPG11Q96JI7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPG11Q96JI7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPG11Q96JI7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.44■□□□□ 0.54
SPG11Q96JI7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPG11Q96JI7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPG11Q96JI7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.43■□□□□ 0.54
SPG11Q96JI7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPG11Q96JI7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.43■□□□□ 0.54
SPG11Q96JI7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.43■□□□□ 0.54
SPG11Q96JI7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.43■□□□□ 0.54
SPG11Q96JI7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.43■□□□□ 0.54
SPG11Q96JI7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPG11Q96JI7 LINC00543-201ENST00000567234 1845 ntBASIC18.43■□□□□ 0.54
SPG11Q96JI7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPG11Q96JI7 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.43■□□□□ 0.54
SPG11Q96JI7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPG11Q96JI7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPG11Q96JI7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.42■□□□□ 0.54
SPG11Q96JI7 AC008550.1-201ENST00000511500 884 ntBASIC18.42■□□□□ 0.54
SPG11Q96JI7 AC092118.2-201ENST00000613495 667 ntBASIC18.42■□□□□ 0.54
SPG11Q96JI7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPG11Q96JI7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPG11Q96JI7 AL353803.4-201ENST00000565882 1934 ntBASIC18.42■□□□□ 0.54
SPG11Q96JI7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPG11Q96JI7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.42■□□□□ 0.54
SPG11Q96JI7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.42■□□□□ 0.54
SPG11Q96JI7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.42■□□□□ 0.54
SPG11Q96JI7 AC142381.4-202ENST00000563973 229 ntBASIC18.42■□□□□ 0.54
SPG11Q96JI7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SPG11Q96JI7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPG11Q96JI7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.42■□□□□ 0.54
SPG11Q96JI7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SPG11Q96JI7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SPG11Q96JI7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPG11Q96JI7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPG11Q96JI7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SPG11Q96JI7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.41■□□□□ 0.54
SPG11Q96JI7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.41■□□□□ 0.54
SPG11Q96JI7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.41■□□□□ 0.54
SPG11Q96JI7 AC068338.2-201ENST00000563278 1430 ntBASIC18.41■□□□□ 0.54
SPG11Q96JI7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.41■□□□□ 0.54
SPG11Q96JI7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.41■□□□□ 0.54
SPG11Q96JI7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPG11Q96JI7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SPG11Q96JI7 AC138932.3-201ENST00000567634 1902 ntBASIC18.41■□□□□ 0.54
SPG11Q96JI7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SPG11Q96JI7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPG11Q96JI7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPG11Q96JI7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SPG11Q96JI7 AL596275.1-201ENST00000423464 877 ntBASIC18.4■□□□□ 0.54
SPG11Q96JI7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPG11Q96JI7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SPG11Q96JI7 MYC-209ENST00000641252 345 ntBASIC18.4■□□□□ 0.54
SPG11Q96JI7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPG11Q96JI7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPG11Q96JI7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPG11Q96JI7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.4■□□□□ 0.54
SPG11Q96JI7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPG11Q96JI7 AC010141.3-201ENST00000456659 717 ntBASIC18.4■□□□□ 0.54
SPG11Q96JI7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.4■□□□□ 0.54
SPG11Q96JI7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SPG11Q96JI7 AP003733.4-201ENST00000623785 1697 ntBASIC18.39■□□□□ 0.54
SPG11Q96JI7 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.39■□□□□ 0.53
SPG11Q96JI7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.39■□□□□ 0.53
SPG11Q96JI7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.39■□□□□ 0.53
SPG11Q96JI7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SPG11Q96JI7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.39■□□□□ 0.53
SPG11Q96JI7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.39■□□□□ 0.53
SPG11Q96JI7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.39■□□□□ 0.53
SPG11Q96JI7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SPG11Q96JI7 MIR1224-201ENST00000408193 85 ntBASIC18.39■□□□□ 0.53
SPG11Q96JI7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.39■□□□□ 0.53
SPG11Q96JI7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
SPG11Q96JI7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.39■□□□□ 0.53
SPG11Q96JI7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SPG11Q96JI7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPG11Q96JI7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
SPG11Q96JI7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
SPG11Q96JI7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms