Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM9SF4Q92544 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TM9SF4Q92544 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.35■□□□□ 0.85
TM9SF4Q92544 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.35■□□□□ 0.85
TM9SF4Q92544 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TM9SF4Q92544 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
TM9SF4Q92544 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.35■□□□□ 0.85
TM9SF4Q92544 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TM9SF4Q92544 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.35■□□□□ 0.85
TM9SF4Q92544 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM9SF4Q92544 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM9SF4Q92544 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM9SF4Q92544 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.35■□□□□ 0.85
TM9SF4Q92544 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TM9SF4Q92544 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM9SF4Q92544 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM9SF4Q92544 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM9SF4Q92544 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.34■□□□□ 0.85
TM9SF4Q92544 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.34■□□□□ 0.85
TM9SF4Q92544 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.34■□□□□ 0.85
TM9SF4Q92544 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.34■□□□□ 0.85
TM9SF4Q92544 AC004911.1-201ENST00000416316 871 ntBASIC20.34■□□□□ 0.85
TM9SF4Q92544 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.34■□□□□ 0.85
TM9SF4Q92544 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TM9SF4Q92544 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.34■□□□□ 0.85
TM9SF4Q92544 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.34■□□□□ 0.85
TM9SF4Q92544 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM9SF4Q92544 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TM9SF4Q92544 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM9SF4Q92544 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM9SF4Q92544 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.34■□□□□ 0.85
TM9SF4Q92544 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM9SF4Q92544 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
TM9SF4Q92544 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM9SF4Q92544 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM9SF4Q92544 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM9SF4Q92544 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM9SF4Q92544 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.33■□□□□ 0.85
TM9SF4Q92544 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.33■□□□□ 0.85
TM9SF4Q92544 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TM9SF4Q92544 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.33■□□□□ 0.84
TM9SF4Q92544 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.33■□□□□ 0.84
TM9SF4Q92544 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TM9SF4Q92544 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TM9SF4Q92544 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.33■□□□□ 0.84
TM9SF4Q92544 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TM9SF4Q92544 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TM9SF4Q92544 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF4Q92544 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.32■□□□□ 0.84
TM9SF4Q92544 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF4Q92544 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.32■□□□□ 0.84
TM9SF4Q92544 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TM9SF4Q92544 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.32■□□□□ 0.84
TM9SF4Q92544 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.32■□□□□ 0.84
TM9SF4Q92544 AC092437.1-201ENST00000624794 1048 ntBASIC20.32■□□□□ 0.84
TM9SF4Q92544 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF4Q92544 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.32■□□□□ 0.84
TM9SF4Q92544 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF4Q92544 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF4Q92544 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF4Q92544 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF4Q92544 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF4Q92544 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TM9SF4Q92544 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF4Q92544 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF4Q92544 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TM9SF4Q92544 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF4Q92544 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
TM9SF4Q92544 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.31■□□□□ 0.84
TM9SF4Q92544 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF4Q92544 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TM9SF4Q92544 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.31■□□□□ 0.84
TM9SF4Q92544 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.31■□□□□ 0.84
TM9SF4Q92544 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.31■□□□□ 0.84
TM9SF4Q92544 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF4Q92544 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.31■□□□□ 0.84
TM9SF4Q92544 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.31■□□□□ 0.84
TM9SF4Q92544 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TM9SF4Q92544 AC068587.7-201ENST00000641602 218 ntBASIC20.31■□□□□ 0.84
TM9SF4Q92544 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF4Q92544 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF4Q92544 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF4Q92544 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.3■□□□□ 0.84
TM9SF4Q92544 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF4Q92544 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TM9SF4Q92544 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF4Q92544 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF4Q92544 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.3■□□□□ 0.84
TM9SF4Q92544 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.3■□□□□ 0.84
TM9SF4Q92544 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF4Q92544 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TM9SF4Q92544 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF4Q92544 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF4Q92544 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
TM9SF4Q92544 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF4Q92544 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.29■□□□□ 0.84
TM9SF4Q92544 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF4Q92544 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
TM9SF4Q92544 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF4Q92544 AC087239.1-201ENST00000622671 572 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms