Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.68■■□□□ 1.22
RNF139Q8WU17 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF139Q8WU17 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF139Q8WU17 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF139Q8WU17 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF139Q8WU17 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF139Q8WU17 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF139Q8WU17 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF139Q8WU17 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF139Q8WU17 AL117328.2-201ENST00000624617 1940 ntBASIC22.67■■□□□ 1.22
RNF139Q8WU17 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF139Q8WU17 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF139Q8WU17 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
RNF139Q8WU17 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF139Q8WU17 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF139Q8WU17 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.67■■□□□ 1.22
RNF139Q8WU17 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.67■■□□□ 1.22
RNF139Q8WU17 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
RNF139Q8WU17 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF139Q8WU17 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF139Q8WU17 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.66■■□□□ 1.22
RNF139Q8WU17 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF139Q8WU17 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF139Q8WU17 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF139Q8WU17 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF139Q8WU17 AC027612.3-201ENST00000413684 1047 ntBASIC22.66■■□□□ 1.22
RNF139Q8WU17 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF139Q8WU17 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF139Q8WU17 SMUG1P1-201ENST00000590640 811 ntBASIC22.66■■□□□ 1.22
RNF139Q8WU17 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF139Q8WU17 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RNF139Q8WU17 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RNF139Q8WU17 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF139Q8WU17 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF139Q8WU17 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF139Q8WU17 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF139Q8WU17 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF139Q8WU17 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF139Q8WU17 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF139Q8WU17 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF139Q8WU17 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF139Q8WU17 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF139Q8WU17 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF139Q8WU17 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.65■■□□□ 1.22
RNF139Q8WU17 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.65■■□□□ 1.22
RNF139Q8WU17 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.65■■□□□ 1.22
RNF139Q8WU17 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.65■■□□□ 1.22
RNF139Q8WU17 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF139Q8WU17 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF139Q8WU17 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF139Q8WU17 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF139Q8WU17 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
RNF139Q8WU17 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RNF139Q8WU17 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RNF139Q8WU17 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF139Q8WU17 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF139Q8WU17 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF139Q8WU17 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
RNF139Q8WU17 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.64■■□□□ 1.21
RNF139Q8WU17 AC097381.1-201ENST00000429019 1296 ntBASIC22.64■■□□□ 1.21
RNF139Q8WU17 YBX1P1-201ENST00000445822 960 ntBASIC22.64■■□□□ 1.21
RNF139Q8WU17 MIR6821-201ENST00000617625 74 ntBASIC22.64■■□□□ 1.21
RNF139Q8WU17 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
RNF139Q8WU17 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.64■■□□□ 1.21
RNF139Q8WU17 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
RNF139Q8WU17 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RNF139Q8WU17 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF139Q8WU17 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF139Q8WU17 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF139Q8WU17 AC026271.2-201ENST00000428091 497 ntBASIC22.63■■□□□ 1.21
RNF139Q8WU17 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF139Q8WU17 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF139Q8WU17 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF139Q8WU17 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF139Q8WU17 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.62■■□□□ 1.21
RNF139Q8WU17 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF139Q8WU17 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF139Q8WU17 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF139Q8WU17 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF139Q8WU17 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RNF139Q8WU17 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF139Q8WU17 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.62■■□□□ 1.21
RNF139Q8WU17 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF139Q8WU17 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF139Q8WU17 BX005040.4-201ENST00000637145 1518 ntBASIC22.62■■□□□ 1.21
RNF139Q8WU17 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF139Q8WU17 AC080038.3-201ENST00000623346 1952 ntBASIC22.61■■□□□ 1.21
RNF139Q8WU17 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF139Q8WU17 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF139Q8WU17 AC123595.1-201ENST00000440769 1046 ntBASIC22.61■■□□□ 1.21
RNF139Q8WU17 OR7E47P-201ENST00000546390 1422 ntBASIC22.61■■□□□ 1.21
RNF139Q8WU17 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF139Q8WU17 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
RNF139Q8WU17 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF139Q8WU17 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF139Q8WU17 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF139Q8WU17 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RNF139Q8WU17 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF139Q8WU17 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF139Q8WU17 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms