Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 SUDS3P1-201ENST00000505831 966 ntBASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 AC126544.1-201ENST00000580842 1059 ntBASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.67■□□□□ 0.58
COLCA1Q6ZS62 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 AL136967.2-201ENST00000623968 743 ntBASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 RASA4CP-201ENST00000424092 1398 ntBASIC18.66■□□□□ 0.58
COLCA1Q6ZS62 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 AC091305.1-201ENST00000479476 895 ntBASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 AF213884.3-201ENST00000563833 479 ntBASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COLCA1Q6ZS62 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
COLCA1Q6ZS62 FAM99A-202ENST00000538190 1989 ntBASIC18.64■□□□□ 0.58
COLCA1Q6ZS62 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COLCA1Q6ZS62 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COLCA1Q6ZS62 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COLCA1Q6ZS62 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COLCA1Q6ZS62 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COLCA1Q6ZS62 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.64■□□□□ 0.57
COLCA1Q6ZS62 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.64■□□□□ 0.57
COLCA1Q6ZS62 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
COLCA1Q6ZS62 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.64■□□□□ 0.57
COLCA1Q6ZS62 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COLCA1Q6ZS62 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.63■□□□□ 0.57
COLCA1Q6ZS62 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COLCA1Q6ZS62 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COLCA1Q6ZS62 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COLCA1Q6ZS62 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.63■□□□□ 0.57
COLCA1Q6ZS62 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.63■□□□□ 0.57
COLCA1Q6ZS62 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.63■□□□□ 0.57
COLCA1Q6ZS62 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COLCA1Q6ZS62 SMUG1P1-201ENST00000590640 811 ntBASIC18.63■□□□□ 0.57
COLCA1Q6ZS62 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COLCA1Q6ZS62 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COLCA1Q6ZS62 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.63■□□□□ 0.57
COLCA1Q6ZS62 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COLCA1Q6ZS62 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
COLCA1Q6ZS62 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COLCA1Q6ZS62 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COLCA1Q6ZS62 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.62■□□□□ 0.57
COLCA1Q6ZS62 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.62■□□□□ 0.57
COLCA1Q6ZS62 AL034346.1-201ENST00000568244 1277 ntBASIC18.62■□□□□ 0.57
COLCA1Q6ZS62 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COLCA1Q6ZS62 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COLCA1Q6ZS62 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COLCA1Q6ZS62 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COLCA1Q6ZS62 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COLCA1Q6ZS62 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COLCA1Q6ZS62 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COLCA1Q6ZS62 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms