Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CASC4Q6P4E1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CASC4Q6P4E1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CASC4Q6P4E1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.97■■□□□ 1.11
CASC4Q6P4E1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.97■■□□□ 1.11
CASC4Q6P4E1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CASC4Q6P4E1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CASC4Q6P4E1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CASC4Q6P4E1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.97■■□□□ 1.11
CASC4Q6P4E1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CASC4Q6P4E1 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.97■■□□□ 1.11
CASC4Q6P4E1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
CASC4Q6P4E1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CASC4Q6P4E1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CASC4Q6P4E1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CASC4Q6P4E1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CASC4Q6P4E1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CASC4Q6P4E1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.96■■□□□ 1.11
CASC4Q6P4E1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.96■■□□□ 1.11
CASC4Q6P4E1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CASC4Q6P4E1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.96■■□□□ 1.11
CASC4Q6P4E1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CASC4Q6P4E1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CASC4Q6P4E1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CASC4Q6P4E1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CASC4Q6P4E1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CASC4Q6P4E1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CASC4Q6P4E1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.95■■□□□ 1.1
CASC4Q6P4E1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.95■■□□□ 1.1
CASC4Q6P4E1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CASC4Q6P4E1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CASC4Q6P4E1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CASC4Q6P4E1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 AC010542.4-201ENST00000563151 1910 ntBASIC21.94■■□□□ 1.1
CASC4Q6P4E1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 AL356441.2-201ENST00000443009 864 ntBASIC21.94■■□□□ 1.1
CASC4Q6P4E1 MIR3181-201ENST00000578512 73 ntBASIC21.94■■□□□ 1.1
CASC4Q6P4E1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CASC4Q6P4E1 AL137060.1-201ENST00000618151 2648 ntBASIC21.93■■□□□ 1.1
CASC4Q6P4E1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
CASC4Q6P4E1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CASC4Q6P4E1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
CASC4Q6P4E1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CASC4Q6P4E1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CASC4Q6P4E1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CASC4Q6P4E1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CASC4Q6P4E1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CASC4Q6P4E1 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.93■■□□□ 1.1
CASC4Q6P4E1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CASC4Q6P4E1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CASC4Q6P4E1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CASC4Q6P4E1 FAM99A-202ENST00000538190 1989 ntBASIC21.92■■□□□ 1.1
CASC4Q6P4E1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CASC4Q6P4E1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CASC4Q6P4E1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CASC4Q6P4E1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CASC4Q6P4E1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CASC4Q6P4E1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CASC4Q6P4E1 AC092171.4-201ENST00000609130 632 ntBASIC21.92■■□□□ 1.1
CASC4Q6P4E1 AL031602.1-201ENST00000633169 911 ntBASIC21.92■■□□□ 1.1
CASC4Q6P4E1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.92■■□□□ 1.1
CASC4Q6P4E1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.92■■□□□ 1.1
CASC4Q6P4E1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CASC4Q6P4E1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CASC4Q6P4E1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CASC4Q6P4E1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CASC4Q6P4E1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.91■■□□□ 1.1
CASC4Q6P4E1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CASC4Q6P4E1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.9■■□□□ 1.1
CASC4Q6P4E1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.9■■□□□ 1.1
CASC4Q6P4E1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CASC4Q6P4E1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CASC4Q6P4E1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms