Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGEF3Q5TH69 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.39■□□□□ 0.53
ARFGEF3Q5TH69 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.39■□□□□ 0.53
ARFGEF3Q5TH69 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.39■□□□□ 0.53
ARFGEF3Q5TH69 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.39■□□□□ 0.53
ARFGEF3Q5TH69 RAP2CP1-201ENST00000605103 478 ntBASIC18.39■□□□□ 0.53
ARFGEF3Q5TH69 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGEF3Q5TH69 AC009237.3-201ENST00000393279 1427 ntBASIC18.39■□□□□ 0.53
ARFGEF3Q5TH69 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGEF3Q5TH69 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGEF3Q5TH69 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGEF3Q5TH69 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.39■□□□□ 0.53
ARFGEF3Q5TH69 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 LINC00526-201ENST00000581067 1875 ntBASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.38■□□□□ 0.53
ARFGEF3Q5TH69 OXCT2P1-201ENST00000447263 1535 ntBASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 AC006015.1-201ENST00000429970 570 ntBASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 LINC02228-203ENST00000641970 1355 ntBASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.37■□□□□ 0.53
ARFGEF3Q5TH69 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 KRT87P-202ENST00000534226 1464 ntBASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
ARFGEF3Q5TH69 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 ID1-201ENST00000376105 1233 ntBASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARFGEF3Q5TH69 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 AC055733.4-201ENST00000638462 1354 ntBASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms