Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RUNDC3AQ59EK9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RUNDC3AQ59EK9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RUNDC3AQ59EK9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RUNDC3AQ59EK9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RUNDC3AQ59EK9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RUNDC3AQ59EK9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
RUNDC3AQ59EK9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.39■□□□□ 0.85
RUNDC3AQ59EK9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RUNDC3AQ59EK9 AC239859.2-201ENST00000444165 318 ntBASIC20.39■□□□□ 0.85
RUNDC3AQ59EK9 AC079089.2-201ENST00000531211 1277 ntBASIC20.39■□□□□ 0.85
RUNDC3AQ59EK9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
RUNDC3AQ59EK9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RUNDC3AQ59EK9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RUNDC3AQ59EK9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RUNDC3AQ59EK9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RUNDC3AQ59EK9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RUNDC3AQ59EK9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RUNDC3AQ59EK9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RUNDC3AQ59EK9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RUNDC3AQ59EK9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RUNDC3AQ59EK9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RUNDC3AQ59EK9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RUNDC3AQ59EK9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.38■□□□□ 0.85
RUNDC3AQ59EK9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.38■□□□□ 0.85
RUNDC3AQ59EK9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
RUNDC3AQ59EK9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RUNDC3AQ59EK9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.38■□□□□ 0.85
RUNDC3AQ59EK9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RUNDC3AQ59EK9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
RUNDC3AQ59EK9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 FEM1AP4-201ENST00000443167 1987 ntBASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RUNDC3AQ59EK9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 TSPY9P-201ENST00000440215 945 ntBASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 TSPY11P-201ENST00000442607 1045 ntBASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 AL117332.1-201ENST00000622628 974 ntBASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.36■□□□□ 0.85
RUNDC3AQ59EK9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 AC026471.6-201ENST00000622954 1905 ntBASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RUNDC3AQ59EK9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 AL451085.2-201ENST00000605085 799 ntBASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 AC241377.3-202ENST00000626088 1088 ntBASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 AC241585.3-202ENST00000628937 1088 ntBASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 AC245100.8-202ENST00000629247 1058 ntBASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms