Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AL137784.2-201ENST00000607332 1000 ntBASIC18.46■□□□□ 0.55
EFNB3Q15768 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.46■□□□□ 0.55
EFNB3Q15768 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EFNB3Q15768 DUSP8P5-201ENST00000422884 1815 ntBASIC18.46■□□□□ 0.55
EFNB3Q15768 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.46■□□□□ 0.55
EFNB3Q15768 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EFNB3Q15768 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EFNB3Q15768 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EFNB3Q15768 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EFNB3Q15768 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
EFNB3Q15768 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.46■□□□□ 0.54
EFNB3Q15768 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EFNB3Q15768 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFNB3Q15768 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFNB3Q15768 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.45■□□□□ 0.54
EFNB3Q15768 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFNB3Q15768 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.45■□□□□ 0.54
EFNB3Q15768 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.45■□□□□ 0.54
EFNB3Q15768 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.45■□□□□ 0.54
EFNB3Q15768 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.45■□□□□ 0.54
EFNB3Q15768 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.45■□□□□ 0.54
EFNB3Q15768 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.45■□□□□ 0.54
EFNB3Q15768 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.45■□□□□ 0.54
EFNB3Q15768 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFNB3Q15768 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFNB3Q15768 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFNB3Q15768 AC005224.4-201ENST00000583262 1652 ntBASIC18.44■□□□□ 0.54
EFNB3Q15768 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EFNB3Q15768 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.44■□□□□ 0.54
EFNB3Q15768 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.44■□□□□ 0.54
EFNB3Q15768 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.44■□□□□ 0.54
EFNB3Q15768 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.44■□□□□ 0.54
EFNB3Q15768 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.44■□□□□ 0.54
EFNB3Q15768 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.44■□□□□ 0.54
EFNB3Q15768 IKBKGP1-201ENST00000612193 1073 ntBASIC18.44■□□□□ 0.54
EFNB3Q15768 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.44■□□□□ 0.54
EFNB3Q15768 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EFNB3Q15768 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EFNB3Q15768 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EFNB3Q15768 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.44■□□□□ 0.54
EFNB3Q15768 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EFNB3Q15768 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EFNB3Q15768 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
EFNB3Q15768 AC079140.4-201ENST00000507448 529 ntBASIC18.43■□□□□ 0.54
EFNB3Q15768 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.43■□□□□ 0.54
EFNB3Q15768 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
EFNB3Q15768 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EFNB3Q15768 AP004607.4-201ENST00000530158 1459 ntBASIC18.43■□□□□ 0.54
EFNB3Q15768 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.43■□□□□ 0.54
EFNB3Q15768 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
EFNB3Q15768 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
EFNB3Q15768 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EFNB3Q15768 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EFNB3Q15768 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EFNB3Q15768 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.42■□□□□ 0.54
EFNB3Q15768 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EFNB3Q15768 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.42■□□□□ 0.54
EFNB3Q15768 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.42■□□□□ 0.54
EFNB3Q15768 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.42■□□□□ 0.54
EFNB3Q15768 AC092437.1-201ENST00000624794 1048 ntBASIC18.42■□□□□ 0.54
EFNB3Q15768 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EFNB3Q15768 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
EFNB3Q15768 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
EFNB3Q15768 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.42■□□□□ 0.54
EFNB3Q15768 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EFNB3Q15768 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.42■□□□□ 0.54
EFNB3Q15768 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
EFNB3Q15768 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
EFNB3Q15768 OR7E47P-201ENST00000546390 1422 ntBASIC18.41■□□□□ 0.54
EFNB3Q15768 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EFNB3Q15768 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.41■□□□□ 0.54
EFNB3Q15768 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EFNB3Q15768 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EFNB3Q15768 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.41■□□□□ 0.54
EFNB3Q15768 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.41■□□□□ 0.54
EFNB3Q15768 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.41■□□□□ 0.54
EFNB3Q15768 AL034346.1-201ENST00000568244 1277 ntBASIC18.41■□□□□ 0.54
EFNB3Q15768 KRT18P61-201ENST00000585825 1298 ntBASIC18.41■□□□□ 0.54
EFNB3Q15768 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.41■□□□□ 0.54
EFNB3Q15768 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
EFNB3Q15768 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.41■□□□□ 0.54
EFNB3Q15768 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFNB3Q15768 AC004854.2-201ENST00000608450 1441 ntBASIC18.4■□□□□ 0.54
EFNB3Q15768 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFNB3Q15768 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.4■□□□□ 0.54
EFNB3Q15768 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFNB3Q15768 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.4■□□□□ 0.54
EFNB3Q15768 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.4■□□□□ 0.54
EFNB3Q15768 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFNB3Q15768 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
EFNB3Q15768 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.4■□□□□ 0.54
EFNB3Q15768 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
EFNB3Q15768 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.4■□□□□ 0.54
EFNB3Q15768 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
EFNB3Q15768 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.4■□□□□ 0.54
EFNB3Q15768 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EFNB3Q15768 KRT19P1-201ENST00000405746 1186 ntBASIC18.4■□□□□ 0.54
EFNB3Q15768 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFNB3Q15768 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EFNB3Q15768 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms