Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
SIRPAP78324 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIRPAP78324 AC092053.2-201ENST00000640557 1818 ntBASIC19.67■□□□□ 0.74
SIRPAP78324 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.67■□□□□ 0.74
SIRPAP78324 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.66■□□□□ 0.74
SIRPAP78324 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SIRPAP78324 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIRPAP78324 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIRPAP78324 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SIRPAP78324 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.66■□□□□ 0.74
SIRPAP78324 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIRPAP78324 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SIRPAP78324 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.66■□□□□ 0.74
SIRPAP78324 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
SIRPAP78324 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SIRPAP78324 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.66■□□□□ 0.74
SIRPAP78324 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SIRPAP78324 AC139530.1-201ENST00000575312 1977 ntBASIC19.66■□□□□ 0.74
SIRPAP78324 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIRPAP78324 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIRPAP78324 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.65■□□□□ 0.74
SIRPAP78324 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.65■□□□□ 0.74
SIRPAP78324 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SIRPAP78324 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIRPAP78324 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.65■□□□□ 0.74
SIRPAP78324 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIRPAP78324 OR2I1P-207ENST00000453522 948 ntBASIC19.65■□□□□ 0.74
SIRPAP78324 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SIRPAP78324 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SIRPAP78324 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SIRPAP78324 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SIRPAP78324 AC004687.1-201ENST00000579003 1625 ntBASIC19.65■□□□□ 0.74
SIRPAP78324 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIRPAP78324 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
SIRPAP78324 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
SIRPAP78324 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIRPAP78324 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIRPAP78324 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIRPAP78324 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.64■□□□□ 0.73
SIRPAP78324 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIRPAP78324 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIRPAP78324 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SIRPAP78324 C11orf96-202ENST00000528572 1834 ntBASIC19.64■□□□□ 0.73
SIRPAP78324 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
SIRPAP78324 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIRPAP78324 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIRPAP78324 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.63■□□□□ 0.73
SIRPAP78324 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SIRPAP78324 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIRPAP78324 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIRPAP78324 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.63■□□□□ 0.73
SIRPAP78324 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIRPAP78324 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIRPAP78324 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIRPAP78324 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.63■□□□□ 0.73
SIRPAP78324 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIRPAP78324 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SIRPAP78324 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIRPAP78324 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SIRPAP78324 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.62■□□□□ 0.73
SIRPAP78324 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.62■□□□□ 0.73
SIRPAP78324 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SIRPAP78324 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIRPAP78324 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.62■□□□□ 0.73
SIRPAP78324 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIRPAP78324 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SIRPAP78324 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIRPAP78324 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIRPAP78324 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SIRPAP78324 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPAP78324 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPAP78324 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SIRPAP78324 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPAP78324 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPAP78324 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SIRPAP78324 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPAP78324 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SIRPAP78324 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SIRPAP78324 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.61■□□□□ 0.73
SIRPAP78324 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.61■□□□□ 0.73
SIRPAP78324 IGHV3-19-201ENST00000521488 291 ntBASIC19.61■□□□□ 0.73
SIRPAP78324 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPAP78324 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.61■□□□□ 0.73
SIRPAP78324 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.61■□□□□ 0.73
SIRPAP78324 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPAP78324 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIRPAP78324 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SIRPAP78324 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.61■□□□□ 0.73
SIRPAP78324 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.61■□□□□ 0.73
SIRPAP78324 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPAP78324 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPAP78324 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPAP78324 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPAP78324 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.6■□□□□ 0.73
SIRPAP78324 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.6■□□□□ 0.73
SIRPAP78324 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.6■□□□□ 0.73
SIRPAP78324 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPAP78324 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPAP78324 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SIRPAP78324 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms