Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2NP61088 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.96■□□□□ 0.63
UBE2NP61088 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2NP61088 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2NP61088 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE2NP61088 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2NP61088 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2NP61088 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2NP61088 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE2NP61088 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2NP61088 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.95■□□□□ 0.62
UBE2NP61088 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2NP61088 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE2NP61088 MIR6084-201ENST00000622012 110 ntBASIC18.95■□□□□ 0.62
UBE2NP61088 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.95■□□□□ 0.62
UBE2NP61088 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.95■□□□□ 0.62
UBE2NP61088 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2NP61088 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2NP61088 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
UBE2NP61088 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2NP61088 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2NP61088 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2NP61088 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.94■□□□□ 0.62
UBE2NP61088 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2NP61088 OR7E47P-201ENST00000546390 1422 ntBASIC18.94■□□□□ 0.62
UBE2NP61088 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2NP61088 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.94■□□□□ 0.62
UBE2NP61088 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2NP61088 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2NP61088 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE2NP61088 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.94■□□□□ 0.62
UBE2NP61088 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2NP61088 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2NP61088 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2NP61088 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2NP61088 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
UBE2NP61088 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.94■□□□□ 0.62
UBE2NP61088 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.94■□□□□ 0.62
UBE2NP61088 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2NP61088 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
UBE2NP61088 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2NP61088 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2NP61088 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.93■□□□□ 0.62
UBE2NP61088 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
UBE2NP61088 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
UBE2NP61088 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE2NP61088 SMUG1P1-201ENST00000590640 811 ntBASIC18.93■□□□□ 0.62
UBE2NP61088 AC012676.1-201ENST00000574705 1949 ntBASIC18.93■□□□□ 0.62
UBE2NP61088 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
UBE2NP61088 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.93■□□□□ 0.62
UBE2NP61088 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE2NP61088 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.93■□□□□ 0.62
UBE2NP61088 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2NP61088 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE2NP61088 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2NP61088 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2NP61088 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2NP61088 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2NP61088 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2NP61088 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.92■□□□□ 0.62
UBE2NP61088 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UBE2NP61088 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UBE2NP61088 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2NP61088 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2NP61088 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2NP61088 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.92■□□□□ 0.62
UBE2NP61088 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2NP61088 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
UBE2NP61088 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.92■□□□□ 0.62
UBE2NP61088 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2NP61088 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UBE2NP61088 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UBE2NP61088 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
UBE2NP61088 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2NP61088 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2NP61088 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
UBE2NP61088 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2NP61088 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2NP61088 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2NP61088 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.91■□□□□ 0.62
UBE2NP61088 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2NP61088 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
UBE2NP61088 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2NP61088 AC027612.3-201ENST00000413684 1047 ntBASIC18.91■□□□□ 0.62
UBE2NP61088 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.91■□□□□ 0.62
UBE2NP61088 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.91■□□□□ 0.62
UBE2NP61088 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.91■□□□□ 0.62
UBE2NP61088 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.91■□□□□ 0.62
UBE2NP61088 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2NP61088 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.91■□□□□ 0.62
UBE2NP61088 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
UBE2NP61088 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2NP61088 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2NP61088 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
UBE2NP61088 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2NP61088 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2NP61088 YBX1P1-201ENST00000445822 960 ntBASIC18.9■□□□□ 0.62
UBE2NP61088 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.9■□□□□ 0.62
UBE2NP61088 RARRES2P6-201ENST00000567333 442 ntBASIC18.9■□□□□ 0.62
UBE2NP61088 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms