Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 YNL035CYNL035C 1170 nt4.85□□□□□ -1.63
HDA1P53973 MPP6YNR024W 561 nt4.85□□□□□ -1.63
HDA1P53973 DCS2YOR173W 1062 nt4.85□□□□□ -1.63
HDA1P53973 SUA7YPR086W 1038 nt4.85□□□□□ -1.63
HDA1P53973 POP7YBR167C 423 nt4.85□□□□□ -1.63
HDA1P53973 YDR131CYDR131C 1671 nt4.85□□□□□ -1.63
HDA1P53973 SEG2YKL105C 3399 nt4.85□□□□□ -1.63
HDA1P53973 TDA7YNL176C 1911 nt4.84□□□□□ -1.63
HDA1P53973 STP4YDL048C 1473 nt4.84□□□□□ -1.63
HDA1P53973 BCS1YDR375C 1371 nt4.84□□□□□ -1.63
HDA1P53973 YCR050CYCR050C 309 nt4.84□□□□□ -1.63
HDA1P53973 DPB4YDR121W 591 nt4.84□□□□□ -1.63
HDA1P53973 GPP1YIL053W 753 nt4.84□□□□□ -1.63
HDA1P53973 MRPL20YKR085C 588 nt4.84□□□□□ -1.63
HDA1P53973 CDC42YLR229C 576 nt4.84□□□□□ -1.63
HDA1P53973 RIB4YOL143C 510 nt4.84□□□□□ -1.63
HDA1P53973 GAL7YBR018C 1101 nt4.84□□□□□ -1.63
HDA1P53973 ERV15YBR210W 429 nt4.84□□□□□ -1.63
HDA1P53973 DSS1YMR287C 2910 nt4.84□□□□□ -1.63
HDA1P53973 SUL2YLR092W 2682 nt4.84□□□□□ -1.63
HDA1P53973 MEF1YLR069C 2286 nt4.84□□□□□ -1.64
HDA1P53973 PRM7YDL039C 2097 nt4.84□□□□□ -1.64
HDA1P53973 YDR261C-DYDR261C-D 4815 nt4.83□□□□□ -1.64
HDA1P53973 CLG1YGL215W 1359 nt4.83□□□□□ -1.64
HDA1P53973 snR7-SsnR7-S 179 nt4.83□□□□□ -1.64
HDA1P53973 YDL228CYDL228C 642 nt4.83□□□□□ -1.64
HDA1P53973 MTC7YEL033W 420 nt4.83□□□□□ -1.64
HDA1P53973 YFR035CYFR035C 345 nt4.83□□□□□ -1.64
HDA1P53973 YVH1YIR026C 1095 nt4.83□□□□□ -1.64
HDA1P53973 YLR444CYLR444C 303 nt4.83□□□□□ -1.64
HDA1P53973 YMR082CYMR082C 357 nt4.83□□□□□ -1.64
HDA1P53973 KIN2YLR096W 3444 nt4.83□□□□□ -1.64
HDA1P53973 DNF2YDR093W 4839 nt4.83□□□□□ -1.64
HDA1P53973 CTT1YGR088W 1689 nt4.83□□□□□ -1.64
HDA1P53973 CET1YPL228W 1650 nt4.83□□□□□ -1.64
HDA1P53973 PRP43YGL120C 2304 nt4.83□□□□□ -1.64
HDA1P53973 SST2YLR452C 2097 nt4.82□□□□□ -1.64
HDA1P53973 IDS2YJL146W 1410 nt4.82□□□□□ -1.64
HDA1P53973 TRM11YOL124C 1302 nt4.82□□□□□ -1.64
HDA1P53973 YDR248CYDR248C 582 nt4.82□□□□□ -1.64
HDA1P53973 tK(CUU)CtK(CUU)C 73 nt4.82□□□□□ -1.64
HDA1P53973 tK(CUU)D1tK(CUU)D1 73 nt4.82□□□□□ -1.64
HDA1P53973 tK(CUU)D2tK(CUU)D2 73 nt4.82□□□□□ -1.64
HDA1P53973 tK(CUU)E1tK(CUU)E1 73 nt4.82□□□□□ -1.64
HDA1P53973 tK(CUU)E2tK(CUU)E2 73 nt4.82□□□□□ -1.64
HDA1P53973 tK(CUU)FtK(CUU)F 73 nt4.82□□□□□ -1.64
HDA1P53973 tK(CUU)G1tK(CUU)G1 73 nt4.82□□□□□ -1.64
HDA1P53973 tK(CUU)G2tK(CUU)G2 73 nt4.82□□□□□ -1.64
HDA1P53973 tK(CUU)G3tK(CUU)G3 73 nt4.82□□□□□ -1.64
HDA1P53973 tK(CUU)ItK(CUU)I 73 nt4.82□□□□□ -1.64
HDA1P53973 tK(CUU)JtK(CUU)J 73 nt4.82□□□□□ -1.64
HDA1P53973 tK(CUU)KtK(CUU)K 73 nt4.82□□□□□ -1.64
HDA1P53973 tK(CUU)MtK(CUU)M 73 nt4.82□□□□□ -1.64
HDA1P53973 tK(CUU)PtK(CUU)P 73 nt4.82□□□□□ -1.64
HDA1P53973 YFR045WYFR045W 930 nt4.82□□□□□ -1.64
HDA1P53973 tL(UAG)JtL(UAG)J 82 nt4.82□□□□□ -1.64
HDA1P53973 tL(UAG)L1tL(UAG)L1 82 nt4.82□□□□□ -1.64
HDA1P53973 tL(UAG)L2tL(UAG)L2 82 nt4.82□□□□□ -1.64
HDA1P53973 TDA10YGR205W 873 nt4.82□□□□□ -1.64
HDA1P53973 tQ(UUG)CtQ(UUG)C 72 nt4.82□□□□□ -1.64
HDA1P53973 tQ(UUG)D1tQ(UUG)D1 72 nt4.82□□□□□ -1.64
HDA1P53973 tQ(UUG)D2tQ(UUG)D2 72 nt4.82□□□□□ -1.64
HDA1P53973 tQ(UUG)D3tQ(UUG)D3 72 nt4.82□□□□□ -1.64
HDA1P53973 tQ(UUG)E1tQ(UUG)E1 72 nt4.82□□□□□ -1.64
HDA1P53973 tQ(UUG)HtQ(UUG)H 72 nt4.82□□□□□ -1.64
HDA1P53973 tQ(UUG)LtQ(UUG)L 72 nt4.82□□□□□ -1.64
HDA1P53973 PRS3YHL011C 963 nt4.82□□□□□ -1.64
HDA1P53973 YIL021C-AYIL021C-A 270 nt4.82□□□□□ -1.64
HDA1P53973 YJL147CYJL147C 1149 nt4.82□□□□□ -1.64
HDA1P53973 DCS1YLR270W 1053 nt4.82□□□□□ -1.64
HDA1P53973 YMR187CYMR187C 1296 nt4.82□□□□□ -1.64
HDA1P53973 DGA1YOR245C 1257 nt4.82□□□□□ -1.64
HDA1P53973 TAF14YPL129W 735 nt4.82□□□□□ -1.64
HDA1P53973 RIB5YBR256C 717 nt4.82□□□□□ -1.64
HDA1P53973 NUP2YLR335W 2163 nt4.82□□□□□ -1.64
HDA1P53973 NAM9YNL137C 1461 nt4.81□□□□□ -1.64
HDA1P53973 EXO70YJL085W 1872 nt4.81□□□□□ -1.64
HDA1P53973 POL12YBL035C 2118 nt4.81□□□□□ -1.64
HDA1P53973 DSE1YER124C 1722 nt4.81□□□□□ -1.64
HDA1P53973 YFL051CYFL051C 483 nt4.81□□□□□ -1.64
HDA1P53973 TOS8YGL096W 831 nt4.81□□□□□ -1.64
HDA1P53973 ARC1YGL105W 1131 nt4.81□□□□□ -1.64
HDA1P53973 GTR2YGR163W 1026 nt4.81□□□□□ -1.64
HDA1P53973 BUD19YJL188C 309 nt4.81□□□□□ -1.64
HDA1P53973 RPS30AYLR287C-A 192 nt4.81□□□□□ -1.64
HDA1P53973 YMR315WYMR315W 1050 nt4.81□□□□□ -1.64
HDA1P53973 IZH2YOL002C 954 nt4.81□□□□□ -1.64
HDA1P53973 MIX23YBL107C 591 nt4.81□□□□□ -1.64
HDA1P53973 RPG1YBR079C 2895 nt4.81□□□□□ -1.64
HDA1P53973 BRE4YDL231C 3378 nt4.81□□□□□ -1.64
HDA1P53973 KAP114YGL241W 3015 nt4.8□□□□□ -1.64
HDA1P53973 FZO1YBR179C 2568 nt4.8□□□□□ -1.64
HDA1P53973 RSM28YDR494W 1086 nt4.8□□□□□ -1.64
HDA1P53973 WBP1YEL002C 1293 nt4.8□□□□□ -1.64
HDA1P53973 EFB1YAL003W 621 nt4.8□□□□□ -1.64
HDA1P53973 RDN5-1RDN5-1 121 nt4.8□□□□□ -1.64
HDA1P53973 RDN5-6RDN5-6 121 nt4.8□□□□□ -1.64
HDA1P53973 CUZ1YNL155W 825 nt4.8□□□□□ -1.64
HDA1P53973 ATG8YBL078C 354 nt4.8□□□□□ -1.64
HDA1P53973 BUD21YOR078W 645 nt4.8□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms