Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 SHH3YMR118C 591 nt3.12□□□□□ -1.91
UFD1P53044 YPR108W-AYPR108W-A 213 nt3.12□□□□□ -1.91
UFD1P53044 UBX5YDR330W 1503 nt3.12□□□□□ -1.91
UFD1P53044 YPR022CYPR022C 3402 nt3.12□□□□□ -1.91
UFD1P53044 TED1YIL039W 1422 nt3.11□□□□□ -1.91
UFD1P53044 AAD3YCR107W 1092 nt3.11□□□□□ -1.91
UFD1P53044 FCF1YDR339C 570 nt3.11□□□□□ -1.91
UFD1P53044 RPS18AYDR450W 441 nt3.11□□□□□ -1.91
UFD1P53044 CLC1YGR167W 702 nt3.11□□□□□ -1.91
UFD1P53044 MRPL6YHR147C 645 nt3.11□□□□□ -1.91
UFD1P53044 RSM25YIL093C 795 nt3.11□□□□□ -1.91
UFD1P53044 RIM11YMR139W 1113 nt3.11□□□□□ -1.91
UFD1P53044 YBL094CYBL094C 333 nt3.11□□□□□ -1.91
UFD1P53044 PNT1YOR266W 1272 nt3.11□□□□□ -1.91
UFD1P53044 YOR338WYOR338W 1092 nt3.11□□□□□ -1.91
UFD1P53044 POC4YPL144W 447 nt3.11□□□□□ -1.91
UFD1P53044 BUD6YLR319C 2367 nt3.11□□□□□ -1.91
UFD1P53044 RTT109YLL002W 1311 nt3.11□□□□□ -1.91
UFD1P53044 GSC2YGR032W 5688 nt3.1□□□□□ -1.91
UFD1P53044 YKL050CYKL050C 2769 nt3.1□□□□□ -1.91
UFD1P53044 FRE4YNR060W 2160 nt3.1□□□□□ -1.91
UFD1P53044 MSA1YOR066W 1890 nt3.1□□□□□ -1.91
UFD1P53044 FAP7YDL166C 594 nt3.1□□□□□ -1.91
UFD1P53044 MGT1YDL200C 567 nt3.1□□□□□ -1.91
UFD1P53044 OTU1YFL044C 906 nt3.1□□□□□ -1.91
UFD1P53044 USE1YGL098W 738 nt3.1□□□□□ -1.91
UFD1P53044 PEX21YGR239C 867 nt3.1□□□□□ -1.91
UFD1P53044 COX19YLL018C-A 297 nt3.1□□□□□ -1.91
UFD1P53044 RPC34YNR003C 954 nt3.1□□□□□ -1.91
UFD1P53044 ERG9YHR190W 1335 nt3.1□□□□□ -1.91
UFD1P53044 MSD1YPL104W 1977 nt3.09□□□□□ -1.91
UFD1P53044 ENA2YDR039C 3276 nt3.09□□□□□ -1.91
UFD1P53044 ENA1YDR040C 3276 nt3.09□□□□□ -1.91
UFD1P53044 RCR2YDR003W 633 nt3.09□□□□□ -1.91
UFD1P53044 ADH4YGL256W 1149 nt3.09□□□□□ -1.91
UFD1P53044 GTF1YGR102C 552 nt3.09□□□□□ -1.91
UFD1P53044 YKE4YIL023C 1041 nt3.09□□□□□ -1.91
UFD1P53044 ARC15YIL062C 465 nt3.09□□□□□ -1.91
UFD1P53044 YAL069WYAL069W 315 nt3.09□□□□□ -1.91
UFD1P53044 SPO20YMR017W 1194 nt3.09□□□□□ -1.91
UFD1P53044 YNL144W-AYNL144W-A 84 nt3.09□□□□□ -1.91
UFD1P53044 GPI2YPL076W 843 nt3.09□□□□□ -1.91
UFD1P53044 ECM8YBR076W 1065 nt3.09□□□□□ -1.91
UFD1P53044 RPS9BYBR189W 588 nt3.09□□□□□ -1.91
UFD1P53044 RRN6YBL014C 2685 nt3.09□□□□□ -1.91
UFD1P53044 SPT10YJL127C 1923 nt3.09□□□□□ -1.92
UFD1P53044 ORC4YPR162C 1590 nt3.08□□□□□ -1.92
UFD1P53044 TCP1YDR212W 1680 nt3.08□□□□□ -1.92
UFD1P53044 AIM14YGL160W 1713 nt3.08□□□□□ -1.92
UFD1P53044 TRE2YOR256C 2430 nt3.08□□□□□ -1.92
UFD1P53044 FMC1YIL098C 468 nt3.08□□□□□ -1.92
UFD1P53044 SGN1YIR001C 753 nt3.08□□□□□ -1.92
UFD1P53044 YAL065CYAL065C 387 nt3.08□□□□□ -1.92
UFD1P53044 YNR071CYNR071C 1029 nt3.08□□□□□ -1.92
UFD1P53044 TAF14YPL129W 735 nt3.08□□□□□ -1.92
UFD1P53044 PUB1YNL016W 1362 nt3.08□□□□□ -1.92
UFD1P53044 YDL071CYDL071C 375 nt3.07□□□□□ -1.92
UFD1P53044 SHU2YDR078C 672 nt3.07□□□□□ -1.92
UFD1P53044 YDR222WYDR222W 1248 nt3.07□□□□□ -1.92
UFD1P53044 BET1YIL004C 429 nt3.07□□□□□ -1.92
UFD1P53044 DLS1YJL065C 504 nt3.07□□□□□ -1.92
UFD1P53044 YMR075C-AYMR075C-A 366 nt3.07□□□□□ -1.92
UFD1P53044 PSF3YOL146W 585 nt3.07□□□□□ -1.92
UFD1P53044 UAF30YOR295W 687 nt3.07□□□□□ -1.92
UFD1P53044 YBR137WYBR137W 540 nt3.07□□□□□ -1.92
UFD1P53044 ATG26YLR189C 3597 nt3.07□□□□□ -1.92
UFD1P53044 DOA4YDR069C 2781 nt3.06□□□□□ -1.92
UFD1P53044 YDR161WYDR161W 1164 nt3.06□□□□□ -1.92
UFD1P53044 RPS8BYER102W 603 nt3.06□□□□□ -1.92
UFD1P53044 TOS8YGL096W 831 nt3.06□□□□□ -1.92
UFD1P53044 MRPS35YGR165W 1038 nt3.06□□□□□ -1.92
UFD1P53044 COS8YHL048W 1146 nt3.06□□□□□ -1.92
UFD1P53044 YHI9YHR029C 885 nt3.06□□□□□ -1.92
UFD1P53044 YIL025CYIL025C 375 nt3.06□□□□□ -1.92
UFD1P53044 YUH1YJR099W 711 nt3.06□□□□□ -1.92
UFD1P53044 CTK1YKL139W 1587 nt3.06□□□□□ -1.92
UFD1P53044 NIT3YLR351C 876 nt3.06□□□□□ -1.92
UFD1P53044 IMD4YML056C 1575 nt3.06□□□□□ -1.92
UFD1P53044 MOH1YBL049W 417 nt3.06□□□□□ -1.92
UFD1P53044 RPS8AYBL072C 603 nt3.06□□□□□ -1.92
UFD1P53044 VID27YNL212W 2349 nt3.06□□□□□ -1.92
UFD1P53044 VAM10YOR068C 345 nt3.06□□□□□ -1.92
UFD1P53044 IAH1YOR126C 717 nt3.06□□□□□ -1.92
UFD1P53044 AUS1YOR011W 4185 nt3.06□□□□□ -1.92
UFD1P53044 TRS120YDR407C 3870 nt3.06□□□□□ -1.92
UFD1P53044 GCN1YGL195W 8019 nt3.05□□□□□ -1.92
UFD1P53044 SSM4YIL030C 3960 nt3.05□□□□□ -1.92
UFD1P53044 YDL026WYDL026W 312 nt3.05□□□□□ -1.92
UFD1P53044 SEM1YDR363W-A 270 nt3.05□□□□□ -1.92
UFD1P53044 POP6YGR030C 477 nt3.05□□□□□ -1.92
UFD1P53044 TMA19YKL056C 504 nt3.05□□□□□ -1.92
UFD1P53044 OMA1YKR087C 1038 nt3.05□□□□□ -1.92
UFD1P53044 MCK1YNL307C 1128 nt3.05□□□□□ -1.92
UFD1P53044 IRC14YOR135C 342 nt3.05□□□□□ -1.92
UFD1P53044 MUM2YBR057C 1101 nt3.05□□□□□ -1.92
UFD1P53044 SMC3YJL074C 3693 nt3.05□□□□□ -1.92
UFD1P53044 MEF1YLR069C 2286 nt3.05□□□□□ -1.92
UFD1P53044 RSC1YGR056W 2787 nt3.05□□□□□ -1.92
UFD1P53044 YDL180WYDL180W 1644 nt3.04□□□□□ -1.92
UFD1P53044 MGR3YMR115W 1506 nt3.04□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 37.3 ms