Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 BET3YKR068C 582 nt3.94□□□□□ -1.78
TY1B-JR1P47098 ECM2YBR065C 1095 nt3.94□□□□□ -1.78
TY1B-JR1P47098 YHR080CYHR080C 4038 nt3.94□□□□□ -1.78
TY1B-JR1P47098 INP52YNL106C 3552 nt3.94□□□□□ -1.78
TY1B-JR1P47098 MDM38YOL027C 1722 nt3.94□□□□□ -1.78
TY1B-JR1P47098 GRE3YHR104W 984 nt3.94□□□□□ -1.78
TY1B-JR1P47098 SGS1YMR190C 4344 nt3.93□□□□□ -1.78
TY1B-JR1P47098 GIP3YPL137C 3831 nt3.93□□□□□ -1.78
TY1B-JR1P47098 CAF130YGR134W 3369 nt3.93□□□□□ -1.78
TY1B-JR1P47098 YDL241WYDL241W 372 nt3.93□□□□□ -1.78
TY1B-JR1P47098 AYR1YIL124W 894 nt3.92□□□□□ -1.78
TY1B-JR1P47098 ATP12YJL180C 978 nt3.92□□□□□ -1.78
TY1B-JR1P47098 PPA2YMR267W 933 nt3.92□□□□□ -1.78
TY1B-JR1P47098 HUL4YJR036C 2679 nt3.92□□□□□ -1.78
TY1B-JR1P47098 YHR214C-EYHR214C-E 300 nt3.91□□□□□ -1.78
TY1B-JR1P47098 YAR070CYAR070C 300 nt3.91□□□□□ -1.78
TY1B-JR1P47098 DDP1YOR163W 567 nt3.91□□□□□ -1.78
TY1B-JR1P47098 MDM30YLR368W 1797 nt3.91□□□□□ -1.78
TY1B-JR1P47098 PHO91YNR013C 2685 nt3.91□□□□□ -1.78
TY1B-JR1P47098 SPT4YGR063C 309 nt3.91□□□□□ -1.78
TY1B-JR1P47098 YIL156W-BYIL156W-B 222 nt3.91□□□□□ -1.78
TY1B-JR1P47098 BOI1YBL085W 2943 nt3.91□□□□□ -1.78
TY1B-JR1P47098 GRS2YPR081C 1857 nt3.91□□□□□ -1.78
TY1B-JR1P47098 VAC17YCL063W 1272 nt3.9□□□□□ -1.79
TY1B-JR1P47098 YMR187CYMR187C 1296 nt3.9□□□□□ -1.79
TY1B-JR1P47098 INP53YOR109W 3324 nt3.9□□□□□ -1.79
TY1B-JR1P47098 SPA2YLL021W 4401 nt3.9□□□□□ -1.79
TY1B-JR1P47098 FLO9YAL063C 3969 nt3.9□□□□□ -1.79
TY1B-JR1P47098 RAD55YDR076W 1221 nt3.89□□□□□ -1.79
TY1B-JR1P47098 YDR491CYDR491C 492 nt3.89□□□□□ -1.79
TY1B-JR1P47098 DSD1YGL196W 1287 nt3.89□□□□□ -1.79
TY1B-JR1P47098 YHR193C-AYHR193C-A 375 nt3.89□□□□□ -1.79
TY1B-JR1P47098 OCA1YNL099C 717 nt3.89□□□□□ -1.79
TY1B-JR1P47098 DNF1YER166W 4716 nt3.89□□□□□ -1.79
TY1B-JR1P47098 PDE1YGL248W 1110 nt3.89□□□□□ -1.79
TY1B-JR1P47098 ATP7YKL016C 525 nt3.89□□□□□ -1.79
TY1B-JR1P47098 HAA1YPR008W 2085 nt3.88□□□□□ -1.79
TY1B-JR1P47098 EBS1YDR206W 2655 nt3.88□□□□□ -1.79
TY1B-JR1P47098 YGR121W-AYGR121W-A 216 nt3.88□□□□□ -1.79
TY1B-JR1P47098 ATG21YPL100W 1491 nt3.87□□□□□ -1.79
TY1B-JR1P47098 SNU23YDL098C 585 nt3.87□□□□□ -1.79
TY1B-JR1P47098 DAD4YDR320C-A 219 nt3.87□□□□□ -1.79
TY1B-JR1P47098 RPS24AYER074W 408 nt3.87□□□□□ -1.79
TY1B-JR1P47098 YJR037WYJR037W 384 nt3.87□□□□□ -1.79
TY1B-JR1P47098 IZH2YOL002C 954 nt3.87□□□□□ -1.79
TY1B-JR1P47098 RPO41YFL036W 4056 nt3.87□□□□□ -1.79
TY1B-JR1P47098 HER1YOR227W 3741 nt3.87□□□□□ -1.79
TY1B-JR1P47098 DBF2YGR092W 1719 nt3.87□□□□□ -1.79
TY1B-JR1P47098 YDR274CYDR274C 372 nt3.86□□□□□ -1.79
TY1B-JR1P47098 RRT13YER066W 558 nt3.86□□□□□ -1.79
TY1B-JR1P47098 MSH2YOL090W 2895 nt3.86□□□□□ -1.79
TY1B-JR1P47098 ATG13YPR185W 2217 nt3.86□□□□□ -1.79
TY1B-JR1P47098 YPT35YHR105W 645 nt3.86□□□□□ -1.79
TY1B-JR1P47098 YIP5YGL161C 933 nt3.85□□□□□ -1.79
TY1B-JR1P47098 YPL107WYPL107W 747 nt3.85□□□□□ -1.79
TY1B-JR1P47098 FKS3YMR306W 5358 nt3.85□□□□□ -1.79
TY1B-JR1P47098 ULP1YPL020C 1866 nt3.84□□□□□ -1.79
TY1B-JR1P47098 ERG11YHR007C 1593 nt3.84□□□□□ -1.79
TY1B-JR1P47098 NCS2YNL119W 1482 nt3.84□□□□□ -1.79
TY1B-JR1P47098 YGL082WYGL082W 1146 nt3.84□□□□□ -1.79
TY1B-JR1P47098 TMN3YER113C 2121 nt3.84□□□□□ -1.79
TY1B-JR1P47098 FPK1YNR047W 2682 nt3.84□□□□□ -1.8
TY1B-JR1P47098 NAB3YPL190C 2409 nt3.84□□□□□ -1.8
TY1B-JR1P47098 YOR277CYOR277C 309 nt3.84□□□□□ -1.8
TY1B-JR1P47098 YGR269WYGR269W 327 nt3.83□□□□□ -1.8
TY1B-JR1P47098 MAL12YGR292W 1755 nt3.83□□□□□ -1.8
TY1B-JR1P47098 URA2YJL130C 6645 nt3.83□□□□□ -1.8
TY1B-JR1P47098 YDL109CYDL109C 1944 nt3.83□□□□□ -1.8
TY1B-JR1P47098 MAK32YCR019W 1092 nt3.82□□□□□ -1.8
TY1B-JR1P47098 RTA1YGR213C 954 nt3.82□□□□□ -1.8
TY1B-JR1P47098 BRR2YER172C 6492 nt3.82□□□□□ -1.8
TY1B-JR1P47098 RRP1YDR087C 837 nt3.81□□□□□ -1.8
TY1B-JR1P47098 FPR1YNL135C 345 nt3.81□□□□□ -1.8
TY1B-JR1P47098 KAP123YER110C 3342 nt3.81□□□□□ -1.8
TY1B-JR1P47098 RPA190YOR341W 4995 nt3.81□□□□□ -1.8
TY1B-JR1P47098 CHS5YLR330W 2016 nt3.81□□□□□ -1.8
TY1B-JR1P47098 RPL24BYGR148C 468 nt3.8□□□□□ -1.8
TY1B-JR1P47098 SAP190YKR028W 3102 nt3.8□□□□□ -1.8
TY1B-JR1P47098 SPC97YHR172W 2472 nt3.79□□□□□ -1.8
TY1B-JR1P47098 FLO10YKR102W 3510 nt3.79□□□□□ -1.8
TY1B-JR1P47098 EDS1YBR033W 2760 nt3.79□□□□□ -1.8
TY1B-JR1P47098 CNA1YLR433C 1662 nt3.78□□□□□ -1.8
TY1B-JR1P47098 RPL14BYHL001W 417 nt3.78□□□□□ -1.8
TY1B-JR1P47098 CEP3YMR168C 1827 nt3.77□□□□□ -1.81
TY1B-JR1P47098 SUL1YBR294W 2580 nt3.77□□□□□ -1.81
TY1B-JR1P47098 IOC2YLR095C 2439 nt3.77□□□□□ -1.81
TY1B-JR1P47098 HOF1YMR032W 2010 nt3.77□□□□□ -1.81
TY1B-JR1P47098 CCT7YJL111W 1653 nt3.77□□□□□ -1.81
TY1B-JR1P47098 GPI19YDR437W 423 nt3.76□□□□□ -1.81
TY1B-JR1P47098 YIL047C-AYIL047C-A 369 nt3.76□□□□□ -1.81
TY1B-JR1P47098 GAS5YOL030W 1455 nt3.76□□□□□ -1.81
TY1B-JR1P47098 CCH1YGR217W 6120 nt3.76□□□□□ -1.81
TY1B-JR1P47098 NGL3YML118W 1518 nt3.76□□□□□ -1.81
TY1B-JR1P47098 RSM10YDR041W 612 nt3.76□□□□□ -1.81
TY1B-JR1P47098 DET1YDR051C 1005 nt3.76□□□□□ -1.81
TY1B-JR1P47098 SCM4YGR049W 564 nt3.76□□□□□ -1.81
TY1B-JR1P47098 YIL174WYIL174W 228 nt3.76□□□□□ -1.81
TY1B-JR1P47098 YJL222W-AYJL222W-A 228 nt3.76□□□□□ -1.81
TY1B-JR1P47098 YBL055CYBL055C 1257 nt3.76□□□□□ -1.81
TY1B-JR1P47098 ARO1YDR127W 4767 nt3.76□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 29.5 ms