Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 MRPL37YBR268W 318 nt2.54□□□□□ -2
RPB11P38902 SEC7YDR170C 6030 nt2.54□□□□□ -2
RPB11P38902 DBP7YKR024C 2229 nt2.54□□□□□ -2
RPB11P38902 ITC1YGL133W 3795 nt2.54□□□□□ -2
RPB11P38902 SSL1YLR005W 1386 nt2.53□□□□□ -2
RPB11P38902 COM2YER130C 1332 nt2.53□□□□□ -2
RPB11P38902 BMH2YDR099W 822 nt2.53□□□□□ -2
RPB11P38902 YBR300CYBR300C 498 nt2.53□□□□□ -2
RPB11P38902 JEN1YKL217W 1851 nt2.53□□□□□ -2
RPB11P38902 YAT2YER024W 2772 nt2.52□□□□□ -2.01
RPB11P38902 YDL071CYDL071C 375 nt2.52□□□□□ -2.01
RPB11P38902 RPS0AYGR214W 759 nt2.52□□□□□ -2.01
RPB11P38902 CDC12YHR107C 1224 nt2.52□□□□□ -2.01
RPB11P38902 RPC37YKR025W 849 nt2.52□□□□□ -2.01
RPB11P38902 ECM4YKR076W 1113 nt2.52□□□□□ -2.01
RPB11P38902 SFH1YLR321C 1281 nt2.52□□□□□ -2.01
RPB11P38902 INN1YNL152W 1230 nt2.52□□□□□ -2.01
RPB11P38902 RFC3YNL290W 1023 nt2.52□□□□□ -2.01
RPB11P38902 JJJ1YNL227C 1773 nt2.51□□□□□ -2.01
RPB11P38902 SEC15YGL233W 2733 nt2.51□□□□□ -2.01
RPB11P38902 SNT1YCR033W 3681 nt2.51□□□□□ -2.01
RPB11P38902 RIF1YBR275C 5751 nt2.51□□□□□ -2.01
RPB11P38902 PMR1YGL167C 2853 nt2.51□□□□□ -2.01
RPB11P38902 EAF5YEL018W 840 nt2.51□□□□□ -2.01
RPB11P38902 CNN1YFR046C 1086 nt2.51□□□□□ -2.01
RPB11P38902 SSU72YNL222W 621 nt2.51□□□□□ -2.01
RPB11P38902 YOR289WYOR289W 756 nt2.51□□□□□ -2.01
RPB11P38902 YPL073CYPL073C 486 nt2.51□□□□□ -2.01
RPB11P38902 VPS53YJL029C 2469 nt2.5□□□□□ -2.01
RPB11P38902 CHO2YGR157W 2610 nt2.5□□□□□ -2.01
RPB11P38902 RPL22AYLR061W 366 nt2.5□□□□□ -2.01
RPB11P38902 VPS71YML041C 843 nt2.5□□□□□ -2.01
RPB11P38902 DDI3YNL335W 678 nt2.5□□□□□ -2.01
RPB11P38902 PEX11YOL147C 711 nt2.5□□□□□ -2.01
RPB11P38902 VPS21YOR089C 633 nt2.5□□□□□ -2.01
RPB11P38902 CEX1YOR112W 2286 nt2.5□□□□□ -2.01
RPB11P38902 YBR238CYBR238C 2196 nt2.5□□□□□ -2.01
RPB11P38902 YGR117CYGR117C 1431 nt2.5□□□□□ -2.01
RPB11P38902 NDT80YHR124W 1884 nt2.5□□□□□ -2.01
RPB11P38902 YHR202WYHR202W 1809 nt2.49□□□□□ -2.01
RPB11P38902 CDC10YCR002C 969 nt2.49□□□□□ -2.01
RPB11P38902 MTC3YGL226W 372 nt2.49□□□□□ -2.01
RPB11P38902 YHR214C-DYHR214C-D 294 nt2.49□□□□□ -2.01
RPB11P38902 AIM25YJR100C 984 nt2.49□□□□□ -2.01
RPB11P38902 YAR069CYAR069C 294 nt2.49□□□□□ -2.01
RPB11P38902 CMR3YPR013C 954 nt2.49□□□□□ -2.01
RPB11P38902 EPO1YMR124W 2832 nt2.49□□□□□ -2.01
RPB11P38902 FLO5YHR211W 3228 nt2.49□□□□□ -2.01
RPB11P38902 GCD6YDR211W 2139 nt2.48□□□□□ -2.01
RPB11P38902 VPS17YOR132W 1656 nt2.48□□□□□ -2.01
RPB11P38902 ATG13YPR185W 2217 nt2.48□□□□□ -2.01
RPB11P38902 CWC2YDL209C 1020 nt2.48□□□□□ -2.01
RPB11P38902 PRM9YAR031W 897 nt2.48□□□□□ -2.01
RPB11P38902 SEC65YML105C 822 nt2.48□□□□□ -2.01
RPB11P38902 YPL107WYPL107W 747 nt2.48□□□□□ -2.01
RPB11P38902 TFC4YGR047C 3078 nt2.48□□□□□ -2.01
RPB11P38902 YFL040WYFL040W 1623 nt2.48□□□□□ -2.01
RPB11P38902 YPS6YIR039C 1614 nt2.48□□□□□ -2.01
RPB11P38902 MDV1YJL112W 2145 nt2.48□□□□□ -2.01
RPB11P38902 ROM1YGR070W 3468 nt2.48□□□□□ -2.01
RPB11P38902 CEP3YMR168C 1827 nt2.47□□□□□ -2.01
RPB11P38902 KRE2YDR483W 1329 nt2.47□□□□□ -2.01
RPB11P38902 FRE2YKL220C 2136 nt2.47□□□□□ -2.01
RPB11P38902 RSN1YMR266W 2862 nt2.47□□□□□ -2.01
RPB11P38902 YPR1YDR368W 939 nt2.47□□□□□ -2.01
RPB11P38902 YJL211CYJL211C 444 nt2.47□□□□□ -2.01
RPB11P38902 SDH3YKL141W 597 nt2.47□□□□□ -2.01
RPB11P38902 PCD1YLR151C 1023 nt2.47□□□□□ -2.01
RPB11P38902 YLR230WYLR230W 306 nt2.47□□□□□ -2.01
RPB11P38902 SIL1YOL031C 1266 nt2.47□□□□□ -2.01
RPB11P38902 NME1NME1 340 nt2.47□□□□□ -2.01
RPB11P38902 DIM1YPL266W 957 nt2.47□□□□□ -2.01
RPB11P38902 ERG11YHR007C 1593 nt2.47□□□□□ -2.01
RPB11P38902 ARG2YJL071W 1725 nt2.47□□□□□ -2.01
RPB11P38902 DAP2YHR028C 2457 nt2.47□□□□□ -2.01
RPB11P38902 ESL1YIL151C 3357 nt2.47□□□□□ -2.01
RPB11P38902 MRH4YGL064C 1686 nt2.47□□□□□ -2.01
RPB11P38902 CMK1YFR014C 1341 nt2.46□□□□□ -2.02
RPB11P38902 DUF1YOL087C 3351 nt2.46□□□□□ -2.02
RPB11P38902 TSC11YER093C 4293 nt2.46□□□□□ -2.02
RPB11P38902 MET10YFR030W 3108 nt2.46□□□□□ -2.02
RPB11P38902 CLB3YDL155W 1284 nt2.46□□□□□ -2.02
RPB11P38902 HIM1YDR317W 1245 nt2.46□□□□□ -2.02
RPB11P38902 RMT2YDR465C 1239 nt2.46□□□□□ -2.02
RPB11P38902 VMA8YEL051W 771 nt2.46□□□□□ -2.02
RPB11P38902 SDP1YIL113W 630 nt2.46□□□□□ -2.02
RPB11P38902 SSN8YNL025C 972 nt2.46□□□□□ -2.02
RPB11P38902 RUF5-1RUF5-1 710 nt2.46□□□□□ -2.02
RPB11P38902 RUF5-2RUF5-2 710 nt2.46□□□□□ -2.02
RPB11P38902 PSF3YOL146W 585 nt2.46□□□□□ -2.02
RPB11P38902 WHI4YDL224C 1950 nt2.46□□□□□ -2.02
RPB11P38902 EXO5YBR163W 1758 nt2.46□□□□□ -2.02
RPB11P38902 CDC20YGL116W 1833 nt2.45□□□□□ -2.02
RPB11P38902 PNC1YGL037C 651 nt2.45□□□□□ -2.02
RPB11P38902 DAL2YIR029W 1032 nt2.45□□□□□ -2.02
RPB11P38902 MCM1YMR043W 861 nt2.45□□□□□ -2.02
RPB11P38902 DSC2YOL073C 969 nt2.45□□□□□ -2.02
RPB11P38902 PUF6YDR496C 1971 nt2.45□□□□□ -2.02
RPB11P38902 GPI13YLL031C 3054 nt2.45□□□□□ -2.02
RPB11P38902 TAO3YIL129C 7131 nt2.45□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms