Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
ATP6V1AP38606 FAM201B-201ENST00000458407 597 ntBASIC27.83■■■□□ 2.05
ATP6V1AP38606 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC27.83■■■□□ 2.05
ATP6V1AP38606 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
ATP6V1AP38606 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
ATP6V1AP38606 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
ATP6V1AP38606 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
ATP6V1AP38606 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.82■■■□□ 2.04
ATP6V1AP38606 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
ATP6V1AP38606 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC27.82■■■□□ 2.04
ATP6V1AP38606 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC27.82■■■□□ 2.04
ATP6V1AP38606 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
ATP6V1AP38606 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC27.82■■■□□ 2.04
ATP6V1AP38606 AC133552.2-202ENST00000575694 574 ntBASIC27.82■■■□□ 2.04
ATP6V1AP38606 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27.82■■■□□ 2.04
ATP6V1AP38606 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
ATP6V1AP38606 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
ATP6V1AP38606 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
ATP6V1AP38606 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ATP6V1AP38606 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ATP6V1AP38606 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ATP6V1AP38606 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
ATP6V1AP38606 AC073210.2-201ENST00000430369 194 ntBASIC27.81■■■□□ 2.04
ATP6V1AP38606 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC27.81■■■□□ 2.04
ATP6V1AP38606 AC098934.4-201ENST00000564127 592 ntBASIC27.81■■■□□ 2.04
ATP6V1AP38606 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC27.81■■■□□ 2.04
ATP6V1AP38606 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
ATP6V1AP38606 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC27.81■■■□□ 2.04
ATP6V1AP38606 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.81■■■□□ 2.04
ATP6V1AP38606 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ATP6V1AP38606 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
ATP6V1AP38606 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.8■■■□□ 2.04
ATP6V1AP38606 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
ATP6V1AP38606 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
ATP6V1AP38606 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC27.8■■■□□ 2.04
ATP6V1AP38606 TBCB-214ENST00000629269 413 ntTSL 5 BASIC27.8■■■□□ 2.04
ATP6V1AP38606 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC27.8■■■□□ 2.04
ATP6V1AP38606 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
ATP6V1AP38606 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.79■■■□□ 2.04
ATP6V1AP38606 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ATP6V1AP38606 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.79■■■□□ 2.04
ATP6V1AP38606 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
ATP6V1AP38606 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
ATP6V1AP38606 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.79■■■□□ 2.04
ATP6V1AP38606 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
ATP6V1AP38606 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC27.79■■■□□ 2.04
ATP6V1AP38606 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC27.79■■■□□ 2.04
ATP6V1AP38606 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
ATP6V1AP38606 AC010536.3-201ENST00000620306 533 ntBASIC27.79■■■□□ 2.04
ATP6V1AP38606 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.79■■■□□ 2.04
ATP6V1AP38606 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
ATP6V1AP38606 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC27.78■■■□□ 2.04
ATP6V1AP38606 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
ATP6V1AP38606 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC27.78■■■□□ 2.04
ATP6V1AP38606 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
ATP6V1AP38606 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
ATP6V1AP38606 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC27.78■■■□□ 2.04
ATP6V1AP38606 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC27.78■■■□□ 2.04
ATP6V1AP38606 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
ATP6V1AP38606 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
ATP6V1AP38606 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
ATP6V1AP38606 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.77■■■□□ 2.04
ATP6V1AP38606 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ATP6V1AP38606 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC27.77■■■□□ 2.04
ATP6V1AP38606 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ATP6V1AP38606 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ATP6V1AP38606 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC27.77■■■□□ 2.04
ATP6V1AP38606 AC010141.2-201ENST00000452426 721 ntBASIC27.77■■■□□ 2.04
ATP6V1AP38606 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
ATP6V1AP38606 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
ATP6V1AP38606 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
ATP6V1AP38606 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
ATP6V1AP38606 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
ATP6V1AP38606 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC27.76■■■□□ 2.03
ATP6V1AP38606 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC27.76■■■□□ 2.03
ATP6V1AP38606 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC27.76■■■□□ 2.03
ATP6V1AP38606 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC27.75■■■□□ 2.03
ATP6V1AP38606 KRT18P20-201ENST00000548986 1279 ntBASIC27.75■■■□□ 2.03
ATP6V1AP38606 AC138907.5-202ENST00000569484 235 ntBASIC27.75■■■□□ 2.03
ATP6V1AP38606 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC27.75■■■□□ 2.03
ATP6V1AP38606 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ATP6V1AP38606 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
ATP6V1AP38606 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ATP6V1AP38606 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.75■■■□□ 2.03
ATP6V1AP38606 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ATP6V1AP38606 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ATP6V1AP38606 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
ATP6V1AP38606 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.74■■■□□ 2.03
ATP6V1AP38606 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.74■■■□□ 2.03
ATP6V1AP38606 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ATP6V1AP38606 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
ATP6V1AP38606 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC27.74■■■□□ 2.03
ATP6V1AP38606 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ATP6V1AP38606 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.74■■■□□ 2.03
ATP6V1AP38606 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
ATP6V1AP38606 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC27.73■■■□□ 2.03
ATP6V1AP38606 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
ATP6V1AP38606 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
ATP6V1AP38606 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC27.72■■■□□ 2.03
ATP6V1AP38606 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC27.72■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms