Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 TDA3YHR009C 1572 nt4.47□□□□□ -1.69
TDP1P38319 GZF3YJL110C 1656 nt4.47□□□□□ -1.69
TDP1P38319 CDC15YAR019C 2925 nt4.47□□□□□ -1.69
TDP1P38319 MSA1YOR066W 1890 nt4.47□□□□□ -1.69
TDP1P38319 FMP30YPL103C 1407 nt4.46□□□□□ -1.69
TDP1P38319 YIG1YPL201C 1386 nt4.46□□□□□ -1.7
TDP1P38319 YCR085WYCR085W 354 nt4.46□□□□□ -1.7
TDP1P38319 tK(CUU)CtK(CUU)C 73 nt4.46□□□□□ -1.7
TDP1P38319 tK(CUU)D1tK(CUU)D1 73 nt4.46□□□□□ -1.7
TDP1P38319 tK(CUU)D2tK(CUU)D2 73 nt4.46□□□□□ -1.7
TDP1P38319 tK(CUU)E1tK(CUU)E1 73 nt4.46□□□□□ -1.7
TDP1P38319 tK(CUU)E2tK(CUU)E2 73 nt4.46□□□□□ -1.7
TDP1P38319 tK(CUU)FtK(CUU)F 73 nt4.46□□□□□ -1.7
TDP1P38319 tK(CUU)G1tK(CUU)G1 73 nt4.46□□□□□ -1.7
TDP1P38319 tK(CUU)G2tK(CUU)G2 73 nt4.46□□□□□ -1.7
TDP1P38319 tK(CUU)G3tK(CUU)G3 73 nt4.46□□□□□ -1.7
TDP1P38319 tK(CUU)ItK(CUU)I 73 nt4.46□□□□□ -1.7
TDP1P38319 tK(CUU)JtK(CUU)J 73 nt4.46□□□□□ -1.7
TDP1P38319 tK(CUU)KtK(CUU)K 73 nt4.46□□□□□ -1.7
TDP1P38319 tK(CUU)MtK(CUU)M 73 nt4.46□□□□□ -1.7
TDP1P38319 tK(CUU)PtK(CUU)P 73 nt4.46□□□□□ -1.7
TDP1P38319 ISC10YER180C 804 nt4.46□□□□□ -1.7
TDP1P38319 YGR064WYGR064W 369 nt4.46□□□□□ -1.7
TDP1P38319 YHL046W-AYHL046W-A 327 nt4.46□□□□□ -1.7
TDP1P38319 YJL028WYJL028W 336 nt4.46□□□□□ -1.7
TDP1P38319 YJL147CYJL147C 1149 nt4.46□□□□□ -1.7
TDP1P38319 YHC1YLR298C 696 nt4.46□□□□□ -1.7
TDP1P38319 TDA5YLR426W 981 nt4.46□□□□□ -1.7
TDP1P38319 ARF3YOR094W 552 nt4.46□□□□□ -1.7
TDP1P38319 SPC29YPL124W 762 nt4.46□□□□□ -1.7
TDP1P38319 RRG8YPR116W 834 nt4.46□□□□□ -1.7
TDP1P38319 VPS38YLR360W 1320 nt4.46□□□□□ -1.7
TDP1P38319 IMA3YIL172C 1770 nt4.45□□□□□ -1.7
TDP1P38319 IMA4YJL221C 1770 nt4.45□□□□□ -1.7
TDP1P38319 RPN4YDL020C 1596 nt4.45□□□□□ -1.7
TDP1P38319 YDR391CYDR391C 699 nt4.45□□□□□ -1.7
TDP1P38319 YGL041W-AYGL041W-A 465 nt4.45□□□□□ -1.7
TDP1P38319 YGL082WYGL082W 1146 nt4.45□□□□□ -1.7
TDP1P38319 YGR293CYGR293C 462 nt4.45□□□□□ -1.7
TDP1P38319 PCL7YIL050W 858 nt4.45□□□□□ -1.7
TDP1P38319 YAL047W-AYAL047W-A 330 nt4.45□□□□□ -1.7
TDP1P38319 DCS1YLR270W 1053 nt4.45□□□□□ -1.7
TDP1P38319 YPR169W-AYPR169W-A 219 nt4.45□□□□□ -1.7
TDP1P38319 YPR170W-BYPR170W-B 258 nt4.45□□□□□ -1.7
TDP1P38319 YBR300CYBR300C 498 nt4.45□□□□□ -1.7
TDP1P38319 MCM2YBL023C 2607 nt4.45□□□□□ -1.7
TDP1P38319 NOP58YOR310C 1536 nt4.45□□□□□ -1.7
TDP1P38319 SWC3YAL011W 1878 nt4.45□□□□□ -1.7
TDP1P38319 TUB2YFL037W 1374 nt4.44□□□□□ -1.7
TDP1P38319 THI11YJR156C 1023 nt4.44□□□□□ -1.7
TDP1P38319 YNL144W-AYNL144W-A 84 nt4.44□□□□□ -1.7
TDP1P38319 YNL277W-AYNL277W-A 189 nt4.44□□□□□ -1.7
TDP1P38319 NNK1YKL171W 2787 nt4.44□□□□□ -1.7
TDP1P38319 NUP2YLR335W 2163 nt4.44□□□□□ -1.7
TDP1P38319 TGL4YKR089C 2733 nt4.44□□□□□ -1.7
TDP1P38319 CDC9YDL164C 2268 nt4.43□□□□□ -1.7
TDP1P38319 HFA1YMR207C 6372 nt4.43□□□□□ -1.7
TDP1P38319 KEX1YGL203C 2190 nt4.43□□□□□ -1.7
TDP1P38319 OLE1YGL055W 1533 nt4.43□□□□□ -1.7
TDP1P38319 RTR1YER139C 681 nt4.43□□□□□ -1.7
TDP1P38319 JAC1YGL018C 555 nt4.43□□□□□ -1.7
TDP1P38319 PRP18YGR006W 756 nt4.43□□□□□ -1.7
TDP1P38319 UPF3YGR072W 1164 nt4.43□□□□□ -1.7
TDP1P38319 RFU1YLR073C 603 nt4.43□□□□□ -1.7
TDP1P38319 FBP1YLR377C 1047 nt4.43□□□□□ -1.7
TDP1P38319 YMR099CYMR099C 894 nt4.43□□□□□ -1.7
TDP1P38319 YMR130WYMR130W 909 nt4.43□□□□□ -1.7
TDP1P38319 YPL205CYPL205C 345 nt4.43□□□□□ -1.7
TDP1P38319 RGL1YPL066W 1440 nt4.43□□□□□ -1.7
TDP1P38319 GAT2YMR136W 1683 nt4.42□□□□□ -1.7
TDP1P38319 RPL13AYDL082W 600 nt4.42□□□□□ -1.7
TDP1P38319 SHU2YDR078C 672 nt4.42□□□□□ -1.7
TDP1P38319 RUB1YDR139C 234 nt4.42□□□□□ -1.7
TDP1P38319 YND1YER005W 1893 nt4.42□□□□□ -1.7
TDP1P38319 YGR126WYGR126W 693 nt4.42□□□□□ -1.7
TDP1P38319 YAE1YJR067C 426 nt4.42□□□□□ -1.7
TDP1P38319 YJR141WYJR141W 1044 nt4.42□□□□□ -1.7
TDP1P38319 SDH3YKL141W 597 nt4.42□□□□□ -1.7
TDP1P38319 YLR347W-AYLR347W-A 141 nt4.42□□□□□ -1.7
TDP1P38319 TOM7YNL070W 183 nt4.42□□□□□ -1.7
TDP1P38319 DGA1YOR245C 1257 nt4.42□□□□□ -1.7
TDP1P38319 MFM1YPL060W 1242 nt4.42□□□□□ -1.7
TDP1P38319 POP7YBR167C 423 nt4.42□□□□□ -1.7
TDP1P38319 BCP1YDR361C 852 nt4.41□□□□□ -1.7
TDP1P38319 YER084W-AYER084W-A 513 nt4.41□□□□□ -1.7
TDP1P38319 CNN1YFR046C 1086 nt4.41□□□□□ -1.7
TDP1P38319 YGL159WYGL159W 1113 nt4.41□□□□□ -1.7
TDP1P38319 COS12YGL263W 1143 nt4.41□□□□□ -1.7
TDP1P38319 SCM4YGR049W 564 nt4.41□□□□□ -1.7
TDP1P38319 YGR109W-AYGR109W-A 873 nt4.41□□□□□ -1.7
TDP1P38319 YHL034W-AYHL034W-A 462 nt4.41□□□□□ -1.7
TDP1P38319 SVP26YHR181W 687 nt4.41□□□□□ -1.7
TDP1P38319 ARC15YIL062C 465 nt4.41□□□□□ -1.7
TDP1P38319 YAL026C-AYAL026C-A 438 nt4.41□□□□□ -1.7
TDP1P38319 IMP2YMR035W 534 nt4.41□□□□□ -1.7
TDP1P38319 SAM37YMR060C 984 nt4.41□□□□□ -1.7
TDP1P38319 YBR016WYBR016W 387 nt4.41□□□□□ -1.7
TDP1P38319 RRG7YOR305W 729 nt4.41□□□□□ -1.7
TDP1P38319 ATG5YPL149W 885 nt4.41□□□□□ -1.7
TDP1P38319 PEP4YPL154C 1218 nt4.41□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 22.6 ms