Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNB4P30926 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CHRNB4P30926 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNB4P30926 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRNB4P30926 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CHRNB4P30926 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHRNB4P30926 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHRNB4P30926 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHRNB4P30926 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHRNB4P30926 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNB4P30926 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNB4P30926 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.14■□□□□ 0.65
CHRNB4P30926 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.14■□□□□ 0.65
CHRNB4P30926 MFSD11-216ENST00000590393 1141 ntBASIC19.14■□□□□ 0.65
CHRNB4P30926 AC104187.1-201ENST00000607510 612 ntBASIC19.14■□□□□ 0.65
CHRNB4P30926 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.14■□□□□ 0.65
CHRNB4P30926 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNB4P30926 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNB4P30926 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNB4P30926 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CHRNB4P30926 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNB4P30926 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNB4P30926 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNB4P30926 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNB4P30926 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.13■□□□□ 0.65
CHRNB4P30926 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.13■□□□□ 0.65
CHRNB4P30926 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNB4P30926 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNB4P30926 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNB4P30926 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNB4P30926 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNB4P30926 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.13■□□□□ 0.65
CHRNB4P30926 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNB4P30926 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNB4P30926 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNB4P30926 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNB4P30926 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNB4P30926 DUSP8P3-201ENST00000399571 1760 ntBASIC19.12■□□□□ 0.65
CHRNB4P30926 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CHRNB4P30926 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNB4P30926 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNB4P30926 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
CHRNB4P30926 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNB4P30926 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNB4P30926 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNB4P30926 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.12■□□□□ 0.65
CHRNB4P30926 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.12■□□□□ 0.65
CHRNB4P30926 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNB4P30926 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.12■□□□□ 0.65
CHRNB4P30926 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.12■□□□□ 0.65
CHRNB4P30926 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNB4P30926 AC231657.2-201ENST00000624556 255 ntBASIC19.12■□□□□ 0.65
CHRNB4P30926 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNB4P30926 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNB4P30926 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.12■□□□□ 0.65
CHRNB4P30926 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNB4P30926 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHRNB4P30926 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRNB4P30926 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.11■□□□□ 0.65
CHRNB4P30926 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRNB4P30926 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHRNB4P30926 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.11■□□□□ 0.65
CHRNB4P30926 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHRNB4P30926 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.11■□□□□ 0.65
CHRNB4P30926 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHRNB4P30926 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.11■□□□□ 0.65
CHRNB4P30926 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRNB4P30926 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNB4P30926 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNB4P30926 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CHRNB4P30926 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNB4P30926 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNB4P30926 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNB4P30926 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNB4P30926 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNB4P30926 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CHRNB4P30926 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.1■□□□□ 0.65
CHRNB4P30926 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.1■□□□□ 0.65
CHRNB4P30926 AL121832.2-201ENST00000610979 668 ntBASIC19.1■□□□□ 0.65
CHRNB4P30926 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNB4P30926 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHRNB4P30926 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.09■□□□□ 0.65
CHRNB4P30926 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.09■□□□□ 0.65
CHRNB4P30926 ABCB10P4-201ENST00000566803 2184 ntBASIC19.09■□□□□ 0.65
CHRNB4P30926 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNB4P30926 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNB4P30926 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNB4P30926 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNB4P30926 ABHD17AP1-201ENST00000358206 933 ntBASIC19.09■□□□□ 0.65
CHRNB4P30926 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNB4P30926 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.09■□□□□ 0.65
CHRNB4P30926 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CHRNB4P30926 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNB4P30926 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.09■□□□□ 0.65
CHRNB4P30926 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.08■□□□□ 0.65
CHRNB4P30926 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.08■□□□□ 0.65
CHRNB4P30926 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.08■□□□□ 0.65
CHRNB4P30926 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.08■□□□□ 0.65
CHRNB4P30926 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNB4P30926 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms