Protein–RNA interactions for Protein: P0CX58

TY1A-PR1, Transposon Ty1-PR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR1P0CX58 IRC16YPR038W 360 nt6.11□□□□□ -1.43
TY1A-PR1P0CX58 YPR174CYPR174C 666 nt6.11□□□□□ -1.43
TY1A-PR1P0CX58 YBR178WYBR178W 375 nt6.11□□□□□ -1.43
TY1A-PR1P0CX58 GCD2YGR083C 1956 nt6.11□□□□□ -1.43
TY1A-PR1P0CX58 BDS1YOL164W 1941 nt6.11□□□□□ -1.43
TY1A-PR1P0CX58 CLA4YNL298W 2529 nt6.1□□□□□ -1.43
TY1A-PR1P0CX58 YPR148CYPR148C 1308 nt6.1□□□□□ -1.43
TY1A-PR1P0CX58 YNL200CYNL200C 741 nt6.1□□□□□ -1.43
TY1A-PR1P0CX58 YPR010C-AYPR010C-A 219 nt6.1□□□□□ -1.43
TY1A-PR1P0CX58 FYV5YCL058C 459 nt6.1□□□□□ -1.43
TY1A-PR1P0CX58 RTK1YDL025C 1863 nt6.1□□□□□ -1.43
TY1A-PR1P0CX58 RMD9YGL107C 1941 nt6.09□□□□□ -1.43
TY1A-PR1P0CX58 IRS4YKR019C 1848 nt6.09□□□□□ -1.43
TY1A-PR1P0CX58 HES1YOR237W 1305 nt6.09□□□□□ -1.43
TY1A-PR1P0CX58 YCR090CYCR090C 549 nt6.09□□□□□ -1.43
TY1A-PR1P0CX58 snR82snR82 268 nt6.09□□□□□ -1.43
TY1A-PR1P0CX58 CNL1YDR357C 369 nt6.09□□□□□ -1.43
TY1A-PR1P0CX58 YJR128WYJR128W 360 nt6.09□□□□□ -1.43
TY1A-PR1P0CX58 ASK1YKL052C 879 nt6.09□□□□□ -1.43
TY1A-PR1P0CX58 OPI8YKR035C 642 nt6.09□□□□□ -1.43
TY1A-PR1P0CX58 HXT2YMR011W 1626 nt6.09□□□□□ -1.43
TY1A-PR1P0CX58 SKO1YNL167C 1944 nt6.09□□□□□ -1.44
TY1A-PR1P0CX58 COX15YER141W 1461 nt6.09□□□□□ -1.44
TY1A-PR1P0CX58 SSF1YHR066W 1362 nt6.08□□□□□ -1.44
TY1A-PR1P0CX58 YCL068CYCL068C 783 nt6.08□□□□□ -1.44
TY1A-PR1P0CX58 MRPL11YDL202W 750 nt6.08□□□□□ -1.44
TY1A-PR1P0CX58 REC104YHR157W 549 nt6.08□□□□□ -1.44
TY1A-PR1P0CX58 LYS1YIR034C 1122 nt6.08□□□□□ -1.44
TY1A-PR1P0CX58 TPK3YKL166C 1197 nt6.08□□□□□ -1.44
TY1A-PR1P0CX58 NAP1YKR048C 1254 nt6.08□□□□□ -1.44
TY1A-PR1P0CX58 SUN4YNL066W 1263 nt6.08□□□□□ -1.44
TY1A-PR1P0CX58 YNL170WYNL170W 396 nt6.08□□□□□ -1.44
TY1A-PR1P0CX58 YOR082CYOR082C 342 nt6.08□□□□□ -1.44
TY1A-PR1P0CX58 EFT2YDR385W 2529 nt6.08□□□□□ -1.44
TY1A-PR1P0CX58 EFT1YOR133W 2529 nt6.08□□□□□ -1.44
TY1A-PR1P0CX58 MIP1YOR330C 3765 nt6.08□□□□□ -1.44
TY1A-PR1P0CX58 TDP1YBR223C 1635 nt6.07□□□□□ -1.44
TY1A-PR1P0CX58 CDC5YMR001C 2118 nt6.07□□□□□ -1.44
TY1A-PR1P0CX58 KRE2YDR483W 1329 nt6.07□□□□□ -1.44
TY1A-PR1P0CX58 LYS9YNR050C 1341 nt6.07□□□□□ -1.44
TY1A-PR1P0CX58 YHR097CYHR097C 1101 nt6.07□□□□□ -1.44
TY1A-PR1P0CX58 BCY1YIL033C 1251 nt6.07□□□□□ -1.44
TY1A-PR1P0CX58 YIL171W-AYIL171W-A 453 nt6.07□□□□□ -1.44
TY1A-PR1P0CX58 YJL220WYJL220W 453 nt6.07□□□□□ -1.44
TY1A-PR1P0CX58 YJR038CYJR038C 363 nt6.07□□□□□ -1.44
TY1A-PR1P0CX58 PRE10YOR362C 867 nt6.07□□□□□ -1.44
TY1A-PR1P0CX58 INA17YPL099C 549 nt6.07□□□□□ -1.44
TY1A-PR1P0CX58 CSC1YLR241W 2349 nt6.07□□□□□ -1.44
TY1A-PR1P0CX58 STE24YJR117W 1362 nt6.06□□□□□ -1.44
TY1A-PR1P0CX58 PLM2YDR501W 1566 nt6.06□□□□□ -1.44
TY1A-PR1P0CX58 TKL2YBR117C 2046 nt6.06□□□□□ -1.44
TY1A-PR1P0CX58 UBP6YFR010W 1500 nt6.06□□□□□ -1.44
TY1A-PR1P0CX58 CIA1YDR267C 993 nt6.06□□□□□ -1.44
TY1A-PR1P0CX58 SPO73YER046W 432 nt6.06□□□□□ -1.44
TY1A-PR1P0CX58 BNA6YFR047C 888 nt6.06□□□□□ -1.44
TY1A-PR1P0CX58 ZRT1YGL255W 1131 nt6.06□□□□□ -1.44
TY1A-PR1P0CX58 PFD1YJL179W 330 nt6.06□□□□□ -1.44
TY1A-PR1P0CX58 DAD2YKR083C 402 nt6.06□□□□□ -1.44
TY1A-PR1P0CX58 YBR090CYBR090C 369 nt6.06□□□□□ -1.44
TY1A-PR1P0CX58 YBR126W-AYBR126W-A 207 nt6.06□□□□□ -1.44
TY1A-PR1P0CX58 PGI1YBR196C 1665 nt6.06□□□□□ -1.44
TY1A-PR1P0CX58 THP1YOL072W 1368 nt6.06□□□□□ -1.44
TY1A-PR1P0CX58 ASN1YPR145W 1719 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 CDC14YFR028C 1656 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 TAX4YJL083W 1815 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 DDC1YPL194W 1839 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 HPT1YDR399W 666 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 YAL004WYAL004W 648 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 YJL119CYJL119C 324 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 LIA1YJR070C 978 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 GSF2YML048W 1212 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 ERG2YMR202W 669 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 ERP4YOR016C 624 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 CTP1YBR291C 900 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 ISC1YER019W 1434 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 ASH1YKL185W 1767 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 EXO5YBR163W 1758 nt6.05□□□□□ -1.44
TY1A-PR1P0CX58 YPD1YDL235C 504 nt6.04□□□□□ -1.44
TY1A-PR1P0CX58 MRPL28YDR462W 444 nt6.04□□□□□ -1.44
TY1A-PR1P0CX58 YGR035W-AYGR035W-A 222 nt6.04□□□□□ -1.44
TY1A-PR1P0CX58 YGR151CYGR151C 336 nt6.04□□□□□ -1.44
TY1A-PR1P0CX58 RPS1BYML063W 768 nt6.04□□□□□ -1.44
TY1A-PR1P0CX58 HHT2YNL031C 411 nt6.04□□□□□ -1.44
TY1A-PR1P0CX58 RNH201YNL072W 924 nt6.04□□□□□ -1.44
TY1A-PR1P0CX58 RPL5YPL131W 894 nt6.04□□□□□ -1.44
TY1A-PR1P0CX58 PRP3YDR473C 1410 nt6.04□□□□□ -1.44
TY1A-PR1P0CX58 IRC5YFR038W 2562 nt6.03□□□□□ -1.44
TY1A-PR1P0CX58 UGA1YGR019W 1416 nt6.03□□□□□ -1.44
TY1A-PR1P0CX58 DJP1YIR004W 1299 nt6.03□□□□□ -1.44
TY1A-PR1P0CX58 YJL182CYJL182C 318 nt6.03□□□□□ -1.44
TY1A-PR1P0CX58 POP3YNL282W 588 nt6.03□□□□□ -1.44
TY1A-PR1P0CX58 PDX3YBR035C 687 nt6.03□□□□□ -1.44
TY1A-PR1P0CX58 RPS11BYBR048W 471 nt6.03□□□□□ -1.44
TY1A-PR1P0CX58 SMX3YPR182W 261 nt6.03□□□□□ -1.44
TY1A-PR1P0CX58 MET3YJR010W 1536 nt6.03□□□□□ -1.44
TY1A-PR1P0CX58 GEF1YJR040W 2340 nt6.03□□□□□ -1.44
TY1A-PR1P0CX58 GEM1YAL048C 1989 nt6.02□□□□□ -1.45
TY1A-PR1P0CX58 ISD11YER048W-A 285 nt6.02□□□□□ -1.45
TY1A-PR1P0CX58 AST2YER101C 1293 nt6.02□□□□□ -1.45
TY1A-PR1P0CX58 CAB4YGR277C 918 nt6.02□□□□□ -1.45
Retrieved 100 of 7,029 protein–RNA pairs in 34.2 ms