Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SNRPA1P09661 LINC00526-201ENST00000581067 1875 ntBASIC27.73■■■□□ 2.03
SNRPA1P09661 AP004607.7-201ENST00000527152 1677 ntBASIC27.73■■■□□ 2.03
SNRPA1P09661 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC27.73■■■□□ 2.03
SNRPA1P09661 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SNRPA1P09661 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SNRPA1P09661 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC27.72■■■□□ 2.03
SNRPA1P09661 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC27.72■■■□□ 2.03
SNRPA1P09661 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC27.72■■■□□ 2.03
SNRPA1P09661 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC27.72■■■□□ 2.03
SNRPA1P09661 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC27.72■■■□□ 2.03
SNRPA1P09661 OR7E47P-201ENST00000546390 1422 ntBASIC27.72■■■□□ 2.03
SNRPA1P09661 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SNRPA1P09661 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC27.72■■■□□ 2.03
SNRPA1P09661 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC27.72■■■□□ 2.03
SNRPA1P09661 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNRPA1P09661 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNRPA1P09661 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
SNRPA1P09661 MAP2K4P1-201ENST00000438453 1195 ntBASIC27.71■■■□□ 2.03
SNRPA1P09661 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNRPA1P09661 DENND3-207ENST00000518347 850 ntTSL 2 BASIC27.71■■■□□ 2.03
SNRPA1P09661 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC27.71■■■□□ 2.03
SNRPA1P09661 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNRPA1P09661 MFSD11-216ENST00000590393 1141 ntBASIC27.71■■■□□ 2.03
SNRPA1P09661 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNRPA1P09661 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.03
SNRPA1P09661 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC27.7■■■□□ 2.03
SNRPA1P09661 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.03
SNRPA1P09661 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC27.7■■■□□ 2.02
SNRPA1P09661 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SNRPA1P09661 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC27.7■■■□□ 2.02
SNRPA1P09661 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC27.7■■■□□ 2.02
SNRPA1P09661 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
SNRPA1P09661 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SNRPA1P09661 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SNRPA1P09661 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
SNRPA1P09661 AC093323.1-202ENST00000635031 2045 ntBASIC27.69■■■□□ 2.02
SNRPA1P09661 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SNRPA1P09661 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC27.69■■■□□ 2.02
SNRPA1P09661 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC27.69■■■□□ 2.02
SNRPA1P09661 MDK-213ENST00000617138 635 ntTSL 2 BASIC27.69■■■□□ 2.02
SNRPA1P09661 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
SNRPA1P09661 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
SNRPA1P09661 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SNRPA1P09661 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
SNRPA1P09661 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
SNRPA1P09661 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SNRPA1P09661 AP001160.3-201ENST00000601484 763 ntBASIC27.68■■■□□ 2.02
SNRPA1P09661 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC27.68■■■□□ 2.02
SNRPA1P09661 GCA-201ENST00000233612 1694 ntTSL 2 BASIC27.68■■■□□ 2.02
SNRPA1P09661 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
SNRPA1P09661 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SNRPA1P09661 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC27.67■■■□□ 2.02
SNRPA1P09661 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SNRPA1P09661 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SNRPA1P09661 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
SNRPA1P09661 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SNRPA1P09661 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SNRPA1P09661 AC006970.2-201ENST00000450065 779 ntBASIC27.67■■■□□ 2.02
SNRPA1P09661 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC27.67■■■□□ 2.02
SNRPA1P09661 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC27.67■■■□□ 2.02
SNRPA1P09661 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC27.67■■■□□ 2.02
SNRPA1P09661 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SNRPA1P09661 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNRPA1P09661 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNRPA1P09661 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SNRPA1P09661 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC27.66■■■□□ 2.02
SNRPA1P09661 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC27.66■■■□□ 2.02
SNRPA1P09661 SERP1-208ENST00000491660 830 ntTSL 2 BASIC27.66■■■□□ 2.02
SNRPA1P09661 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC27.66■■■□□ 2.02
SNRPA1P09661 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC27.66■■■□□ 2.02
SNRPA1P09661 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC27.66■■■□□ 2.02
SNRPA1P09661 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
SNRPA1P09661 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNRPA1P09661 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
SNRPA1P09661 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC27.65■■■□□ 2.02
SNRPA1P09661 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SNRPA1P09661 UBE2DNL-204ENST00000602536 740 ntBASIC27.65■■■□□ 2.02
SNRPA1P09661 TFG-210ENST00000620299 1289 ntTSL 5 BASIC27.65■■■□□ 2.02
SNRPA1P09661 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC27.65■■■□□ 2.02
SNRPA1P09661 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC27.65■■■□□ 2.02
SNRPA1P09661 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC27.65■■■□□ 2.02
SNRPA1P09661 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SNRPA1P09661 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SNRPA1P09661 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SNRPA1P09661 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.02
SNRPA1P09661 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
SNRPA1P09661 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
SNRPA1P09661 PARP1-202ENST00000366792 553 ntTSL 3 BASIC27.64■■■□□ 2.02
SNRPA1P09661 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC27.64■■■□□ 2.02
SNRPA1P09661 NCF1B-203ENST00000435988 1254 ntBASIC27.64■■■□□ 2.02
SNRPA1P09661 AC104771.1-201ENST00000603335 964 ntBASIC27.64■■■□□ 2.02
SNRPA1P09661 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SNRPA1P09661 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
SNRPA1P09661 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC27.63■■■□□ 2.01
SNRPA1P09661 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
SNRPA1P09661 FXN-202ENST00000396364 980 ntTSL 5 BASIC27.63■■■□□ 2.01
SNRPA1P09661 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC27.63■■■□□ 2.01
SNRPA1P09661 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC27.63■■■□□ 2.01
SNRPA1P09661 AL034346.1-201ENST00000568244 1277 ntBASIC27.63■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms