Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
NPHP4O75161 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NPHP4O75161 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC30.95■■■□□ 2.55
NPHP4O75161 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
NPHP4O75161 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
NPHP4O75161 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
NPHP4O75161 AC008550.1-201ENST00000511500 884 ntBASIC30.95■■■□□ 2.54
NPHP4O75161 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC30.95■■■□□ 2.54
NPHP4O75161 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC30.95■■■□□ 2.54
NPHP4O75161 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC30.95■■■□□ 2.54
NPHP4O75161 AC079630.1-202ENST00000618127 1840 ntBASIC30.95■■■□□ 2.54
NPHP4O75161 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
NPHP4O75161 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
NPHP4O75161 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NPHP4O75161 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NPHP4O75161 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC30.94■■■□□ 2.54
NPHP4O75161 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC30.94■■■□□ 2.54
NPHP4O75161 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
NPHP4O75161 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC30.93■■■□□ 2.54
NPHP4O75161 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC30.93■■■□□ 2.54
NPHP4O75161 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.93■■■□□ 2.54
NPHP4O75161 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.93■■■□□ 2.54
NPHP4O75161 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC30.93■■■□□ 2.54
NPHP4O75161 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
NPHP4O75161 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
NPHP4O75161 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC30.92■■■□□ 2.54
NPHP4O75161 AC097658.1-201ENST00000475555 843 ntBASIC30.92■■■□□ 2.54
NPHP4O75161 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC30.92■■■□□ 2.54
NPHP4O75161 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC30.92■■■□□ 2.54
NPHP4O75161 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
NPHP4O75161 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC30.92■■■□□ 2.54
NPHP4O75161 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC30.92■■■□□ 2.54
NPHP4O75161 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC30.92■■■□□ 2.54
NPHP4O75161 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
NPHP4O75161 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
NPHP4O75161 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC30.91■■■□□ 2.54
NPHP4O75161 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
NPHP4O75161 AC091874.3-201ENST00000512672 1195 ntBASIC30.91■■■□□ 2.54
NPHP4O75161 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC30.91■■■□□ 2.54
NPHP4O75161 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC30.91■■■□□ 2.54
NPHP4O75161 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
NPHP4O75161 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
NPHP4O75161 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
NPHP4O75161 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
NPHP4O75161 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
NPHP4O75161 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
NPHP4O75161 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
NPHP4O75161 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
NPHP4O75161 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
NPHP4O75161 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
NPHP4O75161 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
NPHP4O75161 BET1L-207ENST00000529614 560 ntTSL 5 BASIC30.9■■■□□ 2.54
NPHP4O75161 RHOD-202ENST00000532559 538 ntTSL 3 BASIC30.9■■■□□ 2.54
NPHP4O75161 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC30.9■■■□□ 2.54
NPHP4O75161 AC069236.1-201ENST00000604339 616 ntBASIC30.9■■■□□ 2.54
NPHP4O75161 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
NPHP4O75161 AC073648.6-201ENST00000641589 218 ntBASIC30.9■■■□□ 2.54
NPHP4O75161 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC30.89■■■□□ 2.54
NPHP4O75161 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC30.89■■■□□ 2.54
NPHP4O75161 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
NPHP4O75161 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.53
NPHP4O75161 CBFB-203ENST00000561924 584 ntTSL 5 BASIC30.89■■■□□ 2.53
NPHP4O75161 INO80E-214ENST00000620599 515 ntTSL 2 BASIC30.89■■■□□ 2.53
NPHP4O75161 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC30.88■■■□□ 2.53
NPHP4O75161 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
NPHP4O75161 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
NPHP4O75161 DUSP8P5-201ENST00000422884 1815 ntBASIC30.88■■■□□ 2.53
NPHP4O75161 MIR1224-201ENST00000408193 85 ntBASIC30.88■■■□□ 2.53
NPHP4O75161 AC145676.1-201ENST00000514988 2004 ntBASIC30.88■■■□□ 2.53
NPHP4O75161 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
NPHP4O75161 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
NPHP4O75161 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC30.88■■■□□ 2.53
NPHP4O75161 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC30.87■■■□□ 2.53
NPHP4O75161 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
NPHP4O75161 PEX7-202ENST00000367756 680 ntTSL 3 BASIC30.87■■■□□ 2.53
NPHP4O75161 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
NPHP4O75161 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC30.87■■■□□ 2.53
NPHP4O75161 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC30.87■■■□□ 2.53
NPHP4O75161 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC30.87■■■□□ 2.53
NPHP4O75161 AC026366.1-201ENST00000488803 879 ntBASIC30.87■■■□□ 2.53
NPHP4O75161 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
NPHP4O75161 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC30.87■■■□□ 2.53
NPHP4O75161 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
NPHP4O75161 AL121749.1-202ENST00000609313 2153 ntBASIC30.87■■■□□ 2.53
NPHP4O75161 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
NPHP4O75161 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC30.87■■■□□ 2.53
NPHP4O75161 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
NPHP4O75161 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC30.86■■■□□ 2.53
NPHP4O75161 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
NPHP4O75161 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC30.86■■■□□ 2.53
NPHP4O75161 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC30.86■■■□□ 2.53
NPHP4O75161 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC30.86■■■□□ 2.53
NPHP4O75161 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
NPHP4O75161 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC30.86■■■□□ 2.53
NPHP4O75161 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC30.86■■■□□ 2.53
NPHP4O75161 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
NPHP4O75161 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC30.86■■■□□ 2.53
NPHP4O75161 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC30.85■■■□□ 2.53
NPHP4O75161 AP003733.4-201ENST00000623785 1697 ntBASIC30.85■■■□□ 2.53
NPHP4O75161 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms