Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF2O60811 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF2O60811 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.27■□□□□ 0.83
PRAMEF2O60811 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.27■□□□□ 0.83
PRAMEF2O60811 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF2O60811 AC137767.1-201ENST00000602918 1920 ntBASIC20.26■□□□□ 0.83
PRAMEF2O60811 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF2O60811 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF2O60811 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF2O60811 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PRAMEF2O60811 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.26■□□□□ 0.83
PRAMEF2O60811 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF2O60811 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF2O60811 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF2O60811 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF2O60811 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF2O60811 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
PRAMEF2O60811 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF2O60811 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PRAMEF2O60811 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PRAMEF2O60811 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF2O60811 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF2O60811 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF2O60811 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF2O60811 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.25■□□□□ 0.83
PRAMEF2O60811 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
PRAMEF2O60811 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF2O60811 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.25■□□□□ 0.83
PRAMEF2O60811 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.25■□□□□ 0.83
PRAMEF2O60811 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.25■□□□□ 0.83
PRAMEF2O60811 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.25■□□□□ 0.83
PRAMEF2O60811 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.25■□□□□ 0.83
PRAMEF2O60811 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF2O60811 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF2O60811 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF2O60811 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF2O60811 AC242852.2-201ENST00000615738 1807 ntBASIC20.25■□□□□ 0.83
PRAMEF2O60811 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF2O60811 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.24■□□□□ 0.83
PRAMEF2O60811 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEF2O60811 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEF2O60811 AL117328.2-201ENST00000624617 1940 ntBASIC20.24■□□□□ 0.83
PRAMEF2O60811 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.24■□□□□ 0.83
PRAMEF2O60811 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF2O60811 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF2O60811 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.24■□□□□ 0.83
PRAMEF2O60811 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.24■□□□□ 0.83
PRAMEF2O60811 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF2O60811 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.24■□□□□ 0.83
PRAMEF2O60811 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF2O60811 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PRAMEF2O60811 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.24■□□□□ 0.83
PRAMEF2O60811 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.23■□□□□ 0.83
PRAMEF2O60811 OXCT2P1-201ENST00000447263 1535 ntBASIC20.23■□□□□ 0.83
PRAMEF2O60811 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.23■□□□□ 0.83
PRAMEF2O60811 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 AC079089.2-201ENST00000531211 1277 ntBASIC20.23■□□□□ 0.83
PRAMEF2O60811 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PRAMEF2O60811 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PRAMEF2O60811 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
PRAMEF2O60811 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF2O60811 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.22■□□□□ 0.83
PRAMEF2O60811 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF2O60811 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF2O60811 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF2O60811 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF2O60811 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF2O60811 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
PRAMEF2O60811 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF2O60811 KRT18P5-201ENST00000436075 1291 ntBASIC20.22■□□□□ 0.83
PRAMEF2O60811 DUX4L2-201ENST00000561772 1275 ntBASIC20.22■□□□□ 0.83
PRAMEF2O60811 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.22■□□□□ 0.83
PRAMEF2O60811 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
PRAMEF2O60811 DUX4L6-201ENST00000626483 1275 ntBASIC20.22■□□□□ 0.83
PRAMEF2O60811 DUX4L1-201ENST00000627662 1275 ntBASIC20.22■□□□□ 0.83
PRAMEF2O60811 DUX4L8-201ENST00000629013 1275 ntBASIC20.22■□□□□ 0.83
PRAMEF2O60811 DUX4L3-201ENST00000630187 1275 ntBASIC20.22■□□□□ 0.83
PRAMEF2O60811 DUX4L7-201ENST00000630678 1275 ntBASIC20.22■□□□□ 0.83
PRAMEF2O60811 DUX4L5-201ENST00000630834 1275 ntBASIC20.22■□□□□ 0.83
PRAMEF2O60811 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF2O60811 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PRAMEF2O60811 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
PRAMEF2O60811 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.21■□□□□ 0.83
PRAMEF2O60811 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF2O60811 AC139530.1-201ENST00000575312 1977 ntBASIC20.21■□□□□ 0.83
PRAMEF2O60811 AC080038.3-201ENST00000623346 1952 ntBASIC20.21■□□□□ 0.83
PRAMEF2O60811 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms