Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.51■□□□□ 0.71
ZIC3O60481 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZIC3O60481 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.51■□□□□ 0.71
ZIC3O60481 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZIC3O60481 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZIC3O60481 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ZIC3O60481 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZIC3O60481 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZIC3O60481 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.51■□□□□ 0.71
ZIC3O60481 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ZIC3O60481 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ZIC3O60481 AC034268.1-201ENST00000441047 882 ntBASIC19.51■□□□□ 0.71
ZIC3O60481 DUX4L2-201ENST00000561772 1275 ntBASIC19.51■□□□□ 0.71
ZIC3O60481 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.51■□□□□ 0.71
ZIC3O60481 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
ZIC3O60481 DUX4L6-201ENST00000626483 1275 ntBASIC19.51■□□□□ 0.71
ZIC3O60481 DUX4L1-201ENST00000627662 1275 ntBASIC19.51■□□□□ 0.71
ZIC3O60481 DUX4L8-201ENST00000629013 1275 ntBASIC19.51■□□□□ 0.71
ZIC3O60481 DUX4L3-201ENST00000630187 1275 ntBASIC19.51■□□□□ 0.71
ZIC3O60481 DUX4L7-201ENST00000630678 1275 ntBASIC19.51■□□□□ 0.71
ZIC3O60481 DUX4L5-201ENST00000630834 1275 ntBASIC19.51■□□□□ 0.71
ZIC3O60481 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.51■□□□□ 0.71
ZIC3O60481 AP004607.7-201ENST00000527152 1677 ntBASIC19.51■□□□□ 0.71
ZIC3O60481 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZIC3O60481 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.5■□□□□ 0.71
ZIC3O60481 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.5■□□□□ 0.71
ZIC3O60481 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
ZIC3O60481 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZIC3O60481 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZIC3O60481 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
ZIC3O60481 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.5■□□□□ 0.71
ZIC3O60481 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZIC3O60481 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.5■□□□□ 0.71
ZIC3O60481 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.5■□□□□ 0.71
ZIC3O60481 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZIC3O60481 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZIC3O60481 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZIC3O60481 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZIC3O60481 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZIC3O60481 AC009237.3-201ENST00000393279 1427 ntBASIC19.5■□□□□ 0.71
ZIC3O60481 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZIC3O60481 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.49■□□□□ 0.71
ZIC3O60481 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ZIC3O60481 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.49■□□□□ 0.71
ZIC3O60481 KRT18P14-201ENST00000534205 1250 ntBASIC19.49■□□□□ 0.71
ZIC3O60481 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ZIC3O60481 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.49■□□□□ 0.71
ZIC3O60481 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZIC3O60481 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.49■□□□□ 0.71
ZIC3O60481 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.49■□□□□ 0.71
ZIC3O60481 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZIC3O60481 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZIC3O60481 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ZIC3O60481 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZIC3O60481 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZIC3O60481 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ZIC3O60481 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.48■□□□□ 0.71
ZIC3O60481 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZIC3O60481 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.48■□□□□ 0.71
ZIC3O60481 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZIC3O60481 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZIC3O60481 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.48■□□□□ 0.71
ZIC3O60481 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.48■□□□□ 0.71
ZIC3O60481 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ZIC3O60481 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ZIC3O60481 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZIC3O60481 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZIC3O60481 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZIC3O60481 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.48■□□□□ 0.71
ZIC3O60481 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.47■□□□□ 0.71
ZIC3O60481 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZIC3O60481 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZIC3O60481 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZIC3O60481 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZIC3O60481 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZIC3O60481 AC005224.4-201ENST00000583262 1652 ntBASIC19.47■□□□□ 0.71
ZIC3O60481 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZIC3O60481 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.47■□□□□ 0.71
ZIC3O60481 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZIC3O60481 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.47■□□□□ 0.71
ZIC3O60481 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZIC3O60481 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.47■□□□□ 0.71
ZIC3O60481 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZIC3O60481 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.47■□□□□ 0.71
ZIC3O60481 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZIC3O60481 AC233723.2-201ENST00000623798 2106 ntBASIC19.47■□□□□ 0.71
ZIC3O60481 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZIC3O60481 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZIC3O60481 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.47■□□□□ 0.71
ZIC3O60481 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.47■□□□□ 0.71
ZIC3O60481 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZIC3O60481 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.46■□□□□ 0.71
ZIC3O60481 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZIC3O60481 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.46■□□□□ 0.71
ZIC3O60481 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
ZIC3O60481 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.46■□□□□ 0.71
ZIC3O60481 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZIC3O60481 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZIC3O60481 AL162430.1-201ENST00000480705 870 ntBASIC19.46■□□□□ 0.71
ZIC3O60481 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms