Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH7O60245 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH7O60245 PKD1P6-201ENST00000343738 4769 ntBASIC20.65■□□□□ 0.9
PCDH7O60245 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH7O60245 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
PCDH7O60245 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.64■□□□□ 0.9
PCDH7O60245 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH7O60245 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH7O60245 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH7O60245 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH7O60245 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH7O60245 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH7O60245 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH7O60245 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
PCDH7O60245 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH7O60245 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH7O60245 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH7O60245 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH7O60245 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH7O60245 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH7O60245 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH7O60245 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH7O60245 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PCDH7O60245 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PCDH7O60245 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH7O60245 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH7O60245 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH7O60245 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH7O60245 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH7O60245 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH7O60245 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH7O60245 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH7O60245 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH7O60245 AC007375.3-201ENST00000600936 2314 ntBASIC20.63■□□□□ 0.89
PCDH7O60245 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
PCDH7O60245 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
PCDH7O60245 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH7O60245 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH7O60245 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH7O60245 FAM99A-202ENST00000538190 1989 ntBASIC20.63■□□□□ 0.89
PCDH7O60245 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH7O60245 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH7O60245 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PCDH7O60245 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PCDH7O60245 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH7O60245 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH7O60245 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH7O60245 AC010141.3-201ENST00000456659 717 ntBASIC20.62■□□□□ 0.89
PCDH7O60245 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH7O60245 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PCDH7O60245 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH7O60245 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH7O60245 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH7O60245 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH7O60245 OR7E47P-201ENST00000546390 1422 ntBASIC20.61■□□□□ 0.89
PCDH7O60245 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH7O60245 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH7O60245 AC010542.4-201ENST00000563151 1910 ntBASIC20.61■□□□□ 0.89
PCDH7O60245 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH7O60245 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCDH7O60245 SLC47A1P1-202ENST00000449666 945 ntBASIC20.61■□□□□ 0.89
PCDH7O60245 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDH7O60245 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDH7O60245 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDH7O60245 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PCDH7O60245 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH7O60245 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH7O60245 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH7O60245 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH7O60245 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH7O60245 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH7O60245 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDH7O60245 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH7O60245 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH7O60245 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH7O60245 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH7O60245 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH7O60245 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH7O60245 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDH7O60245 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH7O60245 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH7O60245 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDH7O60245 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH7O60245 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH7O60245 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH7O60245 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH7O60245 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.59■□□□□ 0.89
PCDH7O60245 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH7O60245 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH7O60245 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH7O60245 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH7O60245 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH7O60245 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH7O60245 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH7O60245 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDH7O60245 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH7O60245 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH7O60245 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDH7O60245 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH7O60245 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms