Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 LINC01529-204ENST00000636474 1715 ntBASIC16.07■□□□□ 0.16
SNAI2O43623 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNAI2O43623 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.07■□□□□ 0.16
SNAI2O43623 FAM99A-202ENST00000538190 1989 ntBASIC16.07■□□□□ 0.16
SNAI2O43623 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.07■□□□□ 0.16
SNAI2O43623 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SNAI2O43623 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SNAI2O43623 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNAI2O43623 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNAI2O43623 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNAI2O43623 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SNAI2O43623 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.06■□□□□ 0.16
SNAI2O43623 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNAI2O43623 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNAI2O43623 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SNAI2O43623 FP325331.1-202ENST00000623531 1380 ntBASIC16.06■□□□□ 0.16
SNAI2O43623 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.06■□□□□ 0.16
SNAI2O43623 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNAI2O43623 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNAI2O43623 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.06■□□□□ 0.16
SNAI2O43623 AC074183.2-201ENST00000623112 922 ntBASIC16.06■□□□□ 0.16
SNAI2O43623 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SNAI2O43623 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SNAI2O43623 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SNAI2O43623 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNAI2O43623 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNAI2O43623 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SNAI2O43623 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SNAI2O43623 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNAI2O43623 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SNAI2O43623 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.06■□□□□ 0.16
SNAI2O43623 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNAI2O43623 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.06■□□□□ 0.16
SNAI2O43623 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.06■□□□□ 0.16
SNAI2O43623 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.05■□□□□ 0.16
SNAI2O43623 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNAI2O43623 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNAI2O43623 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNAI2O43623 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNAI2O43623 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNAI2O43623 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.05■□□□□ 0.16
SNAI2O43623 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNAI2O43623 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.05■□□□□ 0.16
SNAI2O43623 LINC01960-201ENST00000563759 1884 ntBASIC16.05■□□□□ 0.16
SNAI2O43623 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNAI2O43623 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SNAI2O43623 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNAI2O43623 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNAI2O43623 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNAI2O43623 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SNAI2O43623 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNAI2O43623 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SNAI2O43623 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNAI2O43623 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNAI2O43623 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.04■□□□□ 0.16
SNAI2O43623 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
SNAI2O43623 DUX4L18-201ENST00000553347 1267 ntBASIC16.04■□□□□ 0.16
SNAI2O43623 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.04■□□□□ 0.16
SNAI2O43623 SNX5-217ENST00000606557 1087 ntBASIC16.04■□□□□ 0.16
SNAI2O43623 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.04■□□□□ 0.16
SNAI2O43623 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNAI2O43623 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
SNAI2O43623 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.04■□□□□ 0.16
SNAI2O43623 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
SNAI2O43623 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNAI2O43623 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.03■□□□□ 0.16
SNAI2O43623 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNAI2O43623 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SNAI2O43623 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.03■□□□□ 0.16
SNAI2O43623 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNAI2O43623 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNAI2O43623 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNAI2O43623 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.03■□□□□ 0.16
SNAI2O43623 AC009086.3-201ENST00000623486 1008 ntBASIC16.03■□□□□ 0.16
SNAI2O43623 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNAI2O43623 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNAI2O43623 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.03■□□□□ 0.16
SNAI2O43623 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNAI2O43623 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SNAI2O43623 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNAI2O43623 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNAI2O43623 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
SNAI2O43623 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNAI2O43623 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNAI2O43623 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNAI2O43623 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.03■□□□□ 0.16
SNAI2O43623 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNAI2O43623 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.02■□□□□ 0.16
SNAI2O43623 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNAI2O43623 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.02■□□□□ 0.16
SNAI2O43623 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNAI2O43623 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.02■□□□□ 0.16
SNAI2O43623 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
SNAI2O43623 BHLHE23-202ENST00000612929 1109 ntBASIC16.02■□□□□ 0.16
SNAI2O43623 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNAI2O43623 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNAI2O43623 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNAI2O43623 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SNAI2O43623 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.02■□□□□ 0.15
SNAI2O43623 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms